RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 IL18R1Q13478 541 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 GTF2H3Q13889 308 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 NFE2L1Q14494 772 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 FXNQ16595 210 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 CTU2Q2VPK5 515 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 SYT6Q5T7P8 510 aaPredicted RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 PDE12Q6L8Q7 609 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 ZNF621Q6ZSS3 439 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 MICU2Q8IYU8 434 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 C1orf52Q8N6N3 182 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 ZNF480Q8WV37 535 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 JPH3Q8WXH2 748 aaPredicted RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 NEIL2Q969S2 332 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 PLAGL1Q9UM63 463 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 A0A096LPI6 279 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 SAP18O00422 153 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 NPC1O15118 1278 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ERN1O75460 977 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 C1orf105O95561 183 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 RAP2AP10114 183 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ZNF8P17098 575 aaPredicted RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 ST13P50502 369 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 FADDQ13158 208 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 SLC14A1Q13336 389 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 KCNC3Q14003 757 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 ZNF404Q494X3 552 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 SNAP47Q5SQN1 464 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 IDO2Q6ZQW0 420 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 STK32CQ86UX6 486 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 RASGRP3Q8IV61 690 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 CLECL1Q8IZS7 167 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 PLA2G15Q8NCC3 412 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 WDR20Q8TBZ3 569 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 TMBIM1Q969X1 311 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 SAMD11Q96NU1 681 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 IL17FQ96PD4 163 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 PANX1Q96RD7 426 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 COQ7Q99807 217 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 CPPED1Q9BRF8 314 aaPredicted RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 ALOXE3Q9BYJ1 711 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 CCDC90BQ9GZT6 254 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 SH2B3Q9UQQ2 575 aa11.1□□□□□ -0.63
USP35-207ENST00000530546 PCYT1BQ9Y5K3 369 aaPredicted RBP11.1□□□□□ -0.63
USP35-207ENST00000530546 TCF20Q9UGU0 1960 aaKnown RBP11.09□□□□□ -0.63
USP35-207ENST00000530546 NUP214P35658 2090 aaPredicted RBP11.09□□□□□ -0.63
USP35-207ENST00000530546 GNGT2O14610 69 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 AXIN1O15169 862 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 SNX4O95219 450 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 GBAP04062 536 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 OR2B6P58173 313 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 TBPL1P62380 186 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 PRKCDQ05655 676 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 PIGFQ07326 219 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 UGT8Q16880 541 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 HKDC1Q2TB90 917 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 ERN2Q76MJ5 926 aaKnown RBP11.09□□□□□ -0.63
USP35-207ENST00000530546 GALNT10Q86SR1 603 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 HORMAD1Q86X24 394 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 ZDHHC13Q8IUH4 622 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 METTL4Q8N3J2 472 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 HUS1BQ8NHY5 278 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 NETO1Q8TDF5 533 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 CXorf40AQ8TE69 158 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 LGALS12Q96DT0 336 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 SLC47A1Q96FL8 570 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 NRTNQ99748 197 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 GIMAP4Q9NUV9 329 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 USE1Q9NZ43 259 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 GRIP1Q9Y3R0 1128 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 KCNE2Q9Y6J6 123 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 TRBV5-3A0A0A0MS03 114 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 CDK2AP1O14519 115 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 FPGTO14772 594 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 ZW10O43264 779 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 CREG1O75629 220 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 SERPINA1P01009 418 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 PCCBP05166 539 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 ALDH4A1P30038 563 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 RYKP34925 604 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 RPS13P62277 151 aaKnown RBP11.09□□□□□ -0.63
USP35-207ENST00000530546 RACK1P63244 317 aaKnown RBP11.09□□□□□ -0.63
USP35-207ENST00000530546 MVKQ03426 396 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 CNTN1Q12860 1018 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 GRHL2Q6ISB3 625 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 UBE2Q1Q7Z7E8 422 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 ZNF547Q8IVP9 402 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 UBQLNLQ8IYU4 475 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 HS3ST5Q8IZT8 346 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 NATD1Q8N6N6 113 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 TMIEQ8NEW7 156 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 OR7G3Q8NG95 312 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 CSGALNACT1Q8TDX6 532 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 NELL1Q92832 810 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 PPP1R16AQ96I34 528 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 MBOAT4Q96T53 435 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 UGT2B28Q9BY64 529 aa11.09□□□□□ -0.63
USP35-207ENST00000530546 ZCCHC2Q9C0B9 1178 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms