RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ZNF808Q8N4W9 903 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 OR2A1Q8NGT9 310 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 RDH11Q8TC12 318 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 CALML6Q8TD86 181 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 ADAMTS18Q8TE60 1221 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 MIEF2Q96C03 454 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 KLHL29Q96CT2 875 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 MFSD3Q96ES6 412 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 TSNARE1Q96NA8 513 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 TMEM237Q96Q45 408 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 RAB3IPQ96QF0 476 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 FAM167BQ9BTA0 163 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 MCMBPQ9BTE3 642 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 MYLK2Q9H1R3 596 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 RHOJQ9H4E5 214 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 TIMMDC1Q9NPL8 285 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 SNX15Q9NRS6 342 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 IARS2Q9NSE4 1012 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 TINAGQ9UJW2 476 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 NXT1Q9UKK6 140 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 TCAF1Q9Y4C2 921 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 PSAT1Q9Y617 370 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 CNTRLQ7Z7A1 2325 aa8.09□□□□□ -1.11
TGFBR3-208ENST00000529608 A0A096LPK6 155 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 NSG1A0A0A6YYJ2 146 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 TRAV17A0A0B4J275 112 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 IDSB3KWA1 339 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 CCDC22O60826 627 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 GOT2P00505 430 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 SERPINE1P05121 402 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 SERPINA7P05543 415 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 OR56A5P0C7T3 313 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 COX6B1P14854 86 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 CPA3P15088 417 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 CRABP2P29373 138 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 BDKRB1P46663 353 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ELF3P78545 371 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 BST1Q10588 318 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 RIPK1Q13546 671 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 FASTKQ14296 549 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 PCOLCEQ15113 449 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 HKDC1Q2TB90 917 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ZC3H12BQ5HYM0 836 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 TCTE1Q5JU00 501 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 YOD1Q5VVQ6 348 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 TMEM214Q6NUQ4 689 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 TMEM207Q6UWW9 146 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 RNF44Q7L0R7 432 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ASRGL1Q7L266 308 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 NDUFAF7Q7L592 441 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 WDR75Q8IWA0 830 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 DCUN1D3Q8IWE4 304 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ARHGEF39Q8N4T4 335 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 AMER3Q8N944 861 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 TTC29Q8NA56 475 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 OR2L3Q8NG85 312 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 RFWD2Q8NHY2 731 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 PEX13Q92968 403 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 HDAC10Q969S8 669 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ERP27Q96DN0 273 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 GPR22Q99680 433 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 MIPEPQ99797 713 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 TMEM120AQ9BXJ8 343 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 HES7Q9BYE0 225 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 KCNK13Q9HB14 408 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 TREX1Q9NSU2 369 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ABI3Q9P2A4 366 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 MARCH4Q9P2E8 410 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 HEY2Q9UBP5 337 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ZNF282Q9UDV7 671 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 SEC14L3Q9UDX4 400 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 ZFP69BQ9UJL9 534 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 EMCNQ9ULC0 261 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 PKDREJQ9NTG1 2253 aa8.08□□□□□ -1.12
TGFBR3-208ENST00000529608 LOC102723996A0A087X1L8 192 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 IGHV3-20A0A0C4DH32 117 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 IGKV1-8A0A0C4DH67 115 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 A0A0G2JND7 137 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 DYTNA2CJ06 578 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 OR2A25A4D2G3 310 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 TMEM114B3SHH9 223 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 TARM1B6A8C7 271 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 QSOX1O00391 747 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 FOXS1O43638 330 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 MGRN1O60291 552 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 SRPX2O60687 465 aaPredicted RBP8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 SLC19A2O60779 497 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 SNUPNO95149 360 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 RASAL1O95294 804 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 BMP10O95393 424 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 C1orf105O95561 183 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 AHSGP02765 367 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 EIF2S1P05198 315 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 C2P06681 752 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 FBLP22087 321 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 AOAHP28039 575 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 HNRNPH1P31943 449 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 EMP2P54851 167 aa8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 MAT1AQ00266 395 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-208ENST00000529608 OCA2Q04671 838 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms