RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 C10orf111Q8N326 155 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 FAM86B1Q8N7N1 296 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF555Q8NEP9 628 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 PJA1Q8NG27 643 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 OR2T29Q8NH02 315 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 CREB3L4Q8TEY5 395 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 CYGBQ8WWM9 190 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 DGCR14Q96DF8 476 aaKnown RBP14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 BMFQ96LC9 184 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 F2RL3Q96RI0 385 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF717Q9BY31 904 aaPredicted RBP14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 NLNQ9BYT8 704 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 SLC6A16Q9GZN6 736 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 FGF22Q9HCT0 170 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 PRDM8Q9NQV8 689 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 ACSS1Q9NUB1 689 aaPredicted RBP14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 ZSCAN32Q9NX65 697 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 THUMPD1Q9NXG2 353 aaKnown RBP14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 C3orf18Q9UK00 162 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 DMTF1Q9Y222 760 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 AK5Q9Y6K8 562 aa14.1□□□□□ -0.15
ECHDC1-220ENST00000528402 POM121BA6NF01 834 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 CCDC85CA6NKD9 419 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 C10orf142B7Z368 130 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 E2F6O75461 281 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 TNFRSF21O75509 655 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 TBX6O95947 436 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 MT-ND1P03886 318 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 CHI3L1P36222 383 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 DCTP40126 519 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 FRKP42685 505 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 CRATP43155 626 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 RABIFP47224 123 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 PRIM2P49643 509 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 MC1RQ01726 317 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 IL18R1Q13478 541 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 SMAD4Q13485 552 aaKnown RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 CCINQ13939 588 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 ADPRMQ3LIE5 342 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 OTUD3Q5T2D3 398 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 BORAQ6PGQ7 559 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 ADCK2Q7Z695 626 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 FAM124AQ86V42 546 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 AMIGO1Q86WK6 493 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 ZC3H7AQ8IWR0 971 aaKnown RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 NAGSQ8N159 534 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 OR2L3Q8NG85 312 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 LZICQ8WZA0 190 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 OR1E3Q8WZA6 343 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 ZBED6CLQ96FA7 236 aaPredicted RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 DOHHQ9BU89 302 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 GABARAPL1Q9H0R8 117 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 CAAP1Q9H8G2 361 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 FZD3Q9NPG1 666 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 C1GALT1Q9NS00 363 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 USP36Q9P275 1121 aaKnown RBP14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 ZNF451Q9Y4E5 1061 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 PLEKHM1Q9Y4G2 1056 aa14.09□□□□□ -0.15
ECHDC1-220ENST00000528402 TCRBV21S2A2A0A5A6 115 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 FEZF1A0PJY2 475 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 LRIT2A6NDA9 550 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 TRIM64A6NGJ6 449 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 PRAMEF26H0Y7S4 382 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 PDPK1O15530 556 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 BMP10O95393 424 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 GBAP04062 536 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 TFAP2AP05549 437 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 GABRG2P18507 467 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 PSMB5P28074 263 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 DNAJA1P31689 397 aaKnown RBP14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 ACSL1P33121 698 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 DGKEP52429 567 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 SELENOWP63302 87 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 PPP2R2BQ00005 443 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 GAB1Q13480 694 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 SPIDRQ14159 915 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 LRRC32Q14392 662 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 GK3PQ14409 553 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 KIR2DS3Q14952 304 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 IER5LQ5T953 404 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 TBPL2Q6SJ96 375 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 TMEM92Q6UXU6 159 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 TMEM26Q6ZUK4 368 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 METTL25Q8N6Q8 603 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 MFSD9Q8NBP5 474 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 PNPT1Q8TCS8 783 aaKnown RBP14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 ADAMTS16Q8TE57 1224 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 LCN9Q8WX39 176 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 XKR8Q9H6D3 395 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 SLC2A4RGQ9NR83 387 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 TAAR2Q9P1P5 351 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 ANKMY1Q9P2S6 941 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 DGKBQ9Y6T7 804 aa14.08□□□□□ -0.15
ECHDC1-220ENST00000528402 CEP290O15078 2479 aa14.08□□□□□ -0.16
ECHDC1-220ENST00000528402 OR5K4A6NMS3 321 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 OR52A4PA6NMU1 304 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 LCMT2O60294 686 aaKnown RBP14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SNAP29O95721 258 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 SEMA4FO95754 770 aa14.07□□□□□ -0.16
ECHDC1-220ENST00000528402 TNFP01375 233 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms