RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 AARDQ4LEZ3 155 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 ZNF789Q5FWF6 425 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 C6orf136Q5SQH8 315 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 OTUD3Q5T2D3 398 aaPredicted RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 GRTP1Q5TC63 336 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 AADACL4Q5VUY2 407 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 PSRC1Q6PGN9 363 aaPredicted RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 PPP1R21Q6ZMI0 780 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 ARMCX2Q7L311 632 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 SYVN1Q86TM6 617 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 IQCHQ86VS3 1027 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 TMEM173Q86WV6 379 aaPredicted RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 FOXP4Q8IVH2 680 aaPredicted RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 ZCCHC7Q8N3Z6 543 aaKnown RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 CPSF7Q8N684 471 aaKnown RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 SPERTQ8NA61 448 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 DBF4BQ8NFT6 615 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 NEK11Q8NG66 645 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 ST7LQ8TDW4 575 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 MYADMQ96S97 322 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 THUMPD2Q9BTF0 503 aaKnown RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 CCSER1Q9C0I3 900 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 GOLPH3LQ9H4A5 285 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 DNAJC11Q9NVH1 559 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 TRPC4Q9UBN4 977 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 CCPG1Q9ULG6 757 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 WBP11Q9Y2W2 641 aaKnown RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 TDRKHQ9Y2W6 561 aaKnown RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 NAALAD2Q9Y3Q0 740 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 CRYBG1Q9Y4K1 1723 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 KIAA0232Q92628 1395 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 NFAT5O94916 1531 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 A0A1W2PRB8 838 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 HYKKA2RU49 373 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 ANKUB1A6NFN9 424 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 CTAGE5O15320 804 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 NUDT21O43809 227 aaKnown RBP5.3□□□□□ -1.56
PCF11-202ENST00000528336 TSPAN1O60635 241 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 MED24O75448 989 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 ZNF821O75541 412 aaPredicted RBP5.3□□□□□ -1.56
PCF11-202ENST00000528336 FAM58BPP0C7Q3 252 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 POLR2MP0CAP2 368 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 IGHV4-38-2P0DP08 117 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 NEFHP12036 1026 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 CD27P26842 260 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 SOAT1P35610 550 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 DMPKQ09013 629 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 CCDC122Q5T0U0 273 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 MOXD1Q6UVY6 613 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 BNIPLQ7Z465 357 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 VASH2Q86V25 355 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 COMMD2Q86X83 199 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 CLYBLQ8N0X4 340 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 DCLK2Q8N568 766 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 NIPA2Q8N8Q9 360 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 BANPQ8N9N5 519 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 PAPD5Q8NDF8 572 aaKnown RBP5.3□□□□□ -1.56
PCF11-202ENST00000528336 OR52E1Q8NGJ3 308 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 OR13C2Q8NGS9 318 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 RNF128Q8TEB7 428 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 GANCQ8TET4 914 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 METTL21AQ8WXB1 218 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 THRSPQ92748 146 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 TMEM143Q96AN5 459 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 ZNF501Q96CX3 271 aaPredicted RBP5.3□□□□□ -1.56
PCF11-202ENST00000528336 SLC47A1Q96FL8 570 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 C5orf30Q96GV9 206 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 RTP3Q9BQQ7 232 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 SCRT2Q9NQ03 307 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 SLC52A3Q9NQ40 469 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 OLAHQ9NV23 265 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.3□□□□□ -1.56
PCF11-202ENST00000528336 MDFICQ9P1T7 246 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 PSME2Q9UL46 239 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 STX8Q9UNK0 236 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 GAB2Q9UQC2 676 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 ABCA3Q99758 1704 aa5.3□□□□□ -1.56
PCF11-202ENST00000528336 PHRF1Q9P1Y6 1649 aaKnown RBP5.3□□□□□ -1.56
PCF11-202ENST00000528336 ZNF541Q9H0D2 1346 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 SLIT2O94813 1529 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 ABCC6O95255 1503 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 MARF1Q9Y4F3 1742 aaKnown RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 A0A0G2JLW4 131 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 BLOC1S5-TXNDC5H3BN57 136 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 GMFGO60234 142 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 PCDH7O60245 1069 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 STAMBPO95630 424 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 CFC1BP0CG36 223 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 CFC1P0CG37 223 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 CCDC192P0DO97 292 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 GALP22466 123 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 DNAJB1P25685 340 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 PTPN4P29074 926 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 CHRNA3P32297 505 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 HSD17B2P37059 387 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 TAGLN2P37802 199 aaKnown RBP5.29□□□□□ -1.56
PCF11-202ENST00000528336 METAP1P53582 386 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 SCGB2A2Q13296 93 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 NR1D2Q14995 579 aa5.29□□□□□ -1.56
PCF11-202ENST00000528336 STK11Q15831 433 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms