RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 BANF1O75531 89 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 CLCN2P51788 898 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 NR0B1P51843 470 aaKnown RBP21.98■■□□□ 1.11
CPSF1-202ENST00000527827 GPR85P60893 370 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 PDAP1Q13442 181 aaKnown RBP21.98■■□□□ 1.11
CPSF1-202ENST00000527827 RNASEH2BQ5TBB1 312 aaKnown RBP21.98■■□□□ 1.11
CPSF1-202ENST00000527827 KIAA0408Q6ZU52 694 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 CYP4Z2PQ8N1L4 340 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 TRPV3Q8NET8 790 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 CREB3L4Q8TEY5 395 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 ASB5Q8WWX0 329 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 PELI2Q9HAT8 420 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 RNF6Q9Y252 685 aa21.98■■□□□ 1.11
CPSF1-202ENST00000527827 PABPN1LA6NDY0 278 aaKnown RBP21.97■■□□□ 1.11
CPSF1-202ENST00000527827 URADA6NGE7 173 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 ITGA10O75578 1167 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 TFF3Q07654 80 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 EMC4Q5J8M3 183 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 HECTD2Q5U5R9 776 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 TMEM211Q6ICI0 200 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 SBSNQ6UWP8 590 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 GALNT7Q86SF2 657 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 RPRMLQ8N4K4 120 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 TMEM156Q8N614 296 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 ARMC2Q8NEN0 867 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 OR52N2Q8NGI0 321 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 LILRB4Q8NHJ6 448 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 GABPB2Q8TAK5 448 aaPredicted RBP21.97■■□□□ 1.11
CPSF1-202ENST00000527827 PDLIM2Q96JY6 352 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 FBXW2Q9UKT8 454 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 PPIEQ9UNP9 301 aaKnown RBP21.97■■□□□ 1.11
CPSF1-202ENST00000527827 MMACHCQ9Y4U1 282 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 CLDN16Q9Y5I7 305 aa21.97■■□□□ 1.11
CPSF1-202ENST00000527827 NKX2-6A6NCS4 301 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 MYO1DO94832 1006 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 TOXO94900 526 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 TTC4O95801 387 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 SERPINA6P08185 405 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 ENO2P09104 434 aaPredicted RBP21.96■■□□□ 1.11
CPSF1-202ENST00000527827 CHRNB4P30926 498 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 GPR143P51810 404 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 TERF2Q15554 542 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 MSS51Q4VC12 460 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 TOR1AIP1Q5JTV8 583 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 SPANXN3Q5MJ09 141 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 NXPE4Q6UWF7 544 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 TMPRSS11BQ86T26 416 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 THOC6Q86W42 341 aaKnown RBP21.96■■□□□ 1.11
CPSF1-202ENST00000527827 IGDCC3Q8IVU1 814 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 SCUBE1Q8IWY4 988 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 AIF1LQ9BQI0 150 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 UCK2Q9BZX2 261 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 TP63Q9H3D4 680 aaPredicted RBP21.96■■□□□ 1.11
CPSF1-202ENST00000527827 PLAC1Q9HBJ0 212 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 DEPPQ9NTK1 212 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 DYRK1BQ9Y463 629 aa21.96■■□□□ 1.11
CPSF1-202ENST00000527827 FAM90A27PA6NNH2 459 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 TGFBR3LH3BV60 316 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 PRKNO60260 465 aaPredicted RBP21.95■■□□□ 1.1
CPSF1-202ENST00000527827 PDE9AO76083 593 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 PPP2R1BP30154 601 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 RBBP5Q15291 538 aaKnown RBP21.95■■□□□ 1.1
CPSF1-202ENST00000527827 PPP1R3AQ16821 1122 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 TEDDM1Q5T9Z0 273 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 ARHGAP11AQ6P4F7 1023 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 GPATCH11Q8N954 259 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 CERS2Q96G23 380 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 VMP1Q96GC9 406 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 PDLIM5Q96HC4 596 aaKnown RBP21.95■■□□□ 1.1
CPSF1-202ENST00000527827 PBKQ96KB5 322 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 PNO1Q9NRX1 252 aaKnown RBP21.95■■□□□ 1.1
CPSF1-202ENST00000527827 TNFRSF10DQ9UBN6 386 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 SLC22A14Q9Y267 594 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 VWA7Q9Y334 891 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 EML6Q6ZMW3 1958 aa21.95■■□□□ 1.1
CPSF1-202ENST00000527827 NRDCO43847 1150 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 BTN3A2P78410 334 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 RUNX2Q13950 521 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 C16orf47Q6ZP98 133 aaPredicted RBP21.94■■□□□ 1.1
CPSF1-202ENST00000527827 CCDC71Q8IV32 467 aaPredicted RBP21.94■■□□□ 1.1
CPSF1-202ENST00000527827 RND1Q92730 232 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 NCLNQ969V3 563 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 DEFB127Q9H1M4 99 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 TIMMDC1Q9NPL8 285 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 KCMF1Q9P0J7 381 aa21.94■■□□□ 1.1
CPSF1-202ENST00000527827 PINLYPA6NC86 204 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 TMEM200CA6NKL6 621 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 USP27XA6NNY8 438 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 TUBB4AP04350 444 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 MSX1P28360 303 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 SSR4P51571 173 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 HNRNPFP52597 415 aaKnown RBP21.93■■□□□ 1.1
CPSF1-202ENST00000527827 FAM45BPQ6NSW5 357 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 DMRTC2Q8IXT2 367 aaPredicted RBP21.93■■□□□ 1.1
CPSF1-202ENST00000527827 PSD4Q8NDX1 1056 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 TMEM52Q8NDY8 209 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 FAM45AQ8TCE6 357 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 YARS2Q9Y2Z4 477 aaKnown RBP21.93■■□□□ 1.1
CPSF1-202ENST00000527827 KCNE2Q9Y6J6 123 aa21.93■■□□□ 1.1
CPSF1-202ENST00000527827 FOXO6A8MYZ6 492 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms