RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 RPS10-NUDT3A0A1W2PQS6 291 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 MEIOCA2RUB1 952 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RGSL1A5PLK6 1076 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 KRT87PA6NCN2 255 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RRN3P2A6NIE6 340 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RFPL4AA6NLU0 287 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RHPN2P1A8MT19 583 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RFPL4AL1F8VTS6 287 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 DNASE2O00115 360 aaPredicted RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 KCNK1O00180 336 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 STX16O14662 325 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ITGB1BP1O14713 200 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC30A4O14863 429 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 KLF11O14901 512 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 DCLK1O15075 740 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TO15178 435 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 OGTO15294 1046 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 PHGDHO43175 533 aaKnown RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ADAM12O43184 909 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TYROBPO43914 113 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TBC1D4O60343 1298 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TSPAN3O60637 253 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 PRAMEF10O60809 474 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 AVILO75366 819 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 POP7O75817 140 aaKnown RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 PIAS2O75928 621 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM63AO94886 807 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 GCNT3O95395 438 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TTC4O95801 387 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CRHP06850 196 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 HOXC4P09017 264 aaPredicted RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 SBK2P0C263 348 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 IFI30P13284 250 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CD36P16671 472 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 MSH3P20585 1137 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 OGNP20774 298 aaKnown RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 FPR1P21462 350 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 KCNA5P22460 613 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 GATA3P23771 443 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 PTBP1P26599 531 aaKnown RBP eCLIP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CERS1P27544 350 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 HLA-DMAP28067 261 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 HOXA11P31270 313 aaPredicted RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 FMO4P31512 558 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CHRNA3P32297 505 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 PCGF2P35227 344 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RFC2P35250 354 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 NUP62P37198 522 aaPredicted RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 MAPK9P45984 424 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RPL21P46778 160 aaKnown RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TOB1P50616 345 aaPredicted RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RENBPP51606 427 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CDH8P55286 799 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RAB25P57735 213 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 HERVK_113P63132 956 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 SKP1P63208 163 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF45Q02386 682 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CAV1Q03135 178 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 GAD2Q05329 585 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CYP24A1Q07973 514 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 FGL1Q08830 312 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC13A2Q13183 592 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ART3Q13508 389 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ASAH1Q13510 395 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 DYRK1AQ13627 763 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 FGL2Q14314 439 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 POLD3Q15054 466 aaPredicted RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 PDCD1Q15116 288 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 MAPK11Q15759 364 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CARTPTQ16568 116 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 UGT8Q16880 541 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 KNOP1Q1ED39 458 aaKnown RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 MICBQ29980 383 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 HKDC1Q2TB90 917 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 UAP1L1Q3KQV9 507 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 MGAT5BQ3V5L5 792 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM119Q4V9L6 283 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ATP13A4Q4VNC1 1196 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF484Q5JVG2 852 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 MANEAQ5SRI9 462 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 LDLRAP1Q5SW96 308 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 C1orf185Q5T7R7 199 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RIPPLY2Q5TAB7 128 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 LIPJQ5W064 366 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 GPR139Q6DWJ6 353 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 SUMO4Q6EEV6 95 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RAET1GQ6H3X3 334 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 OR5M10Q6IEU7 315 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 CENPPQ6IPU0 288 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC25A24Q6NUK1 477 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 WDR73Q6P4I2 378 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TTC33Q6PID6 262 aaPredicted RBP3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RHBDF2Q6PJF5 856 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF773Q6PK81 442 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 KCTD8Q6ZWB6 473 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 GDPD3Q7L5L3 318 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 TPRA1Q86W33 373 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RAB43Q86YS6 212 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 RASAL3Q86YV0 1011 aa3.56□□□□□ -1.84
CLNS1A-209ENST00000527299 LGI2Q8N0V4 545 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms