RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CPNE5Q9HCH3 593 aa11.18□□□□□ -0.62
LINC01001-201ENST00000526704 TAS2R16Q9NYV7 291 aa11.18□□□□□ -0.62
LINC01001-201ENST00000526704 CFAP20Q9Y6A4 193 aaKnown RBP11.18□□□□□ -0.62
LINC01001-201ENST00000526704 PTPRSQ13332 1948 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 LAMA2P24043 3122 aaKnown RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 A8MVJ9 347 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 TGM5O43548 720 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ATG13O75143 517 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 KLHL18O94889 574 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 TIMP2P16035 220 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 PBLDP30039 288 aaPredicted RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 SERPINB1P30740 379 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 XCR1P46094 333 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 RBBP4Q09028 425 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ST3GAL4Q11206 333 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ELOAQ14241 798 aaKnown RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 PRSS53Q2L4Q9 553 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 FBXO43Q4G163 708 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 C10orf62Q5T681 223 aaPredicted RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ADIPOR2Q86V24 386 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 DEPDC4Q8N2C3 294 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 STX19Q8N4C7 294 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 KBTBD8Q8NFY9 601 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 OR5AK3PQ8NH89 298 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 HTRA1Q92743 480 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 CENPOQ9BU64 300 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 KLHL25Q9H0H3 589 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 TRIM39Q9HCM9 518 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 DMRT3Q9NQL9 472 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 C1GALT1Q9NS00 363 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 SPG21Q9NZD8 308 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 DUSP12Q9UNI6 340 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 PRAMEF33A0A0G2JMD5 474 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 TSPAN11A1L157 253 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 SAGE2PA6NJ88 616 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 QSOX1O00391 747 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 SAP18O00422 153 aaKnown RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 PCDH17O14917 1159 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 PRAMEF10O60809 474 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 RECKO95980 971 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 SELENBP1Q13228 472 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 DOC2BQ14184 412 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 TMEM215Q68D42 235 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 RNF130Q86XS8 419 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 OXR1Q8N573 874 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 AMER2Q8N7J2 671 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 LMNTD1Q8N9Z9 388 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 B3GNT7Q8NFL0 401 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF480Q8WV37 535 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 GEMIN6Q8WXD5 167 aaKnown RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 GLYATL1Q969I3 302 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF689Q96CS4 500 aaPredicted RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 VWCEQ96DN2 955 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 VPS35Q96QK1 796 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 FAM129BQ96TA1 746 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 RC3H2Q9HBD1 1191 aaKnown RBP11.17□□□□□ -0.62
LINC01001-201ENST00000526704 ACER3Q9NUN7 267 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 MS4A12Q9NXJ0 267 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 MAFFQ9ULX9 164 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 UGT2A1Q9Y4X1 527 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 KCNE2Q9Y6J6 123 aa11.17□□□□□ -0.62
LINC01001-201ENST00000526704 GPR37L1O60883 481 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 LILRB3O75022 631 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 KCNK2O95069 426 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 LRG1P02750 347 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 CTSLP07711 333 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 GSTT2P0CG29 244 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 GSTT2BP0CG30 244 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 POU2F1P14859 743 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 SPNP16150 400 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 RGS6P49758 472 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 SEPHS1P49903 392 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PNLIPRP1P54315 467 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PCBP3P57721 371 aaKnown RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 CYP4F2P78329 520 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 CDK6Q00534 326 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PRKCDQ05655 676 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 SLBPQ14493 270 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 SLC5A12Q1EHB4 618 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF284Q2VY69 593 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF658BQ4V348 819 aaPredicted RBP11.16□□□□□ -0.62
LINC01001-201ENST00000526704 ARSIQ5FYB1 569 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 CRB2Q5IJ48 1285 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PNCKQ6P2M8 343 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 TECPR1Q7Z6L1 1165 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 C16orf78Q8WTQ4 265 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 REPS1Q96D71 796 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 WDR34Q96EX3 536 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 Q96MT0 163 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PIP5K1AQ99755 562 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 SPNS1Q9H2V7 528 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 EHD1Q9H4M9 534 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 IMPAD1Q9NX62 359 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 QPCTLQ9NXS2 382 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 GULP1Q9UBP9 304 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 IFT52Q9Y366 437 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 MAP4K5Q9Y4K4 846 aa11.16□□□□□ -0.62
LINC01001-201ENST00000526704 PIPSLA2A3N6 862 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms