RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CYP3A5P20815 502 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ZNF10P21506 573 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 UQCRC2P22695 453 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 MAT2AP31153 395 aaKnown RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 DCTDP32321 178 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 CD80P33681 288 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ARPC4P59998 168 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ERVFRD-1P60508 538 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 VBP1P61758 197 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 SKP1P63208 163 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 DYRK1AQ13627 763 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 DMC1Q14565 340 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 HLXQ14774 488 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 TGFBIQ15582 683 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 TPSAB1Q15661 275 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 TMEM44Q2T9K0 475 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FAM214AQ32MH5 1076 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 SLC25A53Q5H9E4 307 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 CEP78Q5JTW2 689 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 VWA5B1Q5TIE3 1220 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FAM46CQ5VWP2 391 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 PLEKHA7Q6IQ23 1121 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 MFSD12Q6NUT3 480 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FOXR2Q6PJQ5 311 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 CCDC137Q6PK04 289 aaKnown RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 ZNF474Q6S9Z5 364 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 RPTNQ6XPR3 784 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 PQLC2Q6ZP29 291 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 CDHR3Q6ZTQ4 885 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 GPRIN3Q6ZVF9 776 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FRA10AC1Q70Z53 315 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 LHFPL4Q7Z7J7 247 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ADGRE4PQ86SQ3 457 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FAM124AQ86V42 546 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ADGRG3Q86Y34 549 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 GPR65Q8IYL9 337 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 C16orf71Q8IYS4 520 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 ST13P4Q8IZP2 240 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 THEM5Q8N1Q8 247 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 PAPD5Q8NDF8 572 aaKnown RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 GPRC5AQ8NFJ5 357 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 OR4N2Q8NGD1 307 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 UBA3Q8TBC4 463 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 TBC1D16Q8TBP0 767 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 LPAR1Q92633 364 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 AKAP1Q92667 903 aaKnown RBP eCLIP4.23□□□□□ -1.73
CD44-213ENST00000525209 GLG1Q92896 1179 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FAM136AQ96C01 138 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FBXL8Q96CD0 374 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 FAM122AQ96E09 287 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ZC3HAV1LQ96H79 300 aaKnown RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 PBKQ96KB5 322 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 TSNARE1Q96NA8 513 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 DUX5Q96PT3 197 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 OR6C1Q96RD1 312 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 TGS1Q96RS0 853 aaKnown RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 SYT3Q9BQG1 590 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 CBWD1Q9BRT8 395 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 TMEM175Q9BSA9 504 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 IFT27Q9BW83 186 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 RNF26Q9BY78 433 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 ZMYND12Q9H0C1 365 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 OR10A2Q9H208 303 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 SNX25Q9H3E2 840 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 BICC1Q9H694 974 aaKnown RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 CDH20Q9HBT6 801 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 RAB9BQ9NP90 201 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 IL23AQ9NPF7 189 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 SLAMF8Q9P0V8 285 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 GGA2Q9UJY4 613 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ERVK-11Q9UQG0 969 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 TNNQ9UQP3 1299 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 PIGLQ9Y2B2 252 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 ZDHHC9Q9Y397 364 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 KIF14Q15058 1648 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 POLR1AO95602 1720 aaPredicted RBP4.23□□□□□ -1.73
CD44-213ENST00000525209 ZNF518AQ6AHZ1 1483 aa4.23□□□□□ -1.73
CD44-213ENST00000525209 PTPRKQ15262 1439 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 NCOA1Q15788 1441 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 ARHGEF12Q9NZN5 1544 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 LTBP4Q8N2S1 1624 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 A0A0U1RQF3 1178 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 IQANK1A0A1B0GTG1 560 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 A1L4Q6 167 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 TRPC5OSA6NMA1 111 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SNTNA6NMZ2 147 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 C9JVG2 144 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 MS4A18H0YCH9 400 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 VCYO14598 125 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 XRCC3O43542 346 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 TRAPPC3O43617 180 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 TMPRSS11DO60235 418 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 RBBP9O75884 186 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 LCA5LO95447 670 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 GOT2P00505 430 aaKnown RBP4.22□□□□□ -1.73
CD44-213ENST00000525209 CHRNGP07510 517 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 SFTPBP07988 381 aa4.22□□□□□ -1.73
CD44-213ENST00000525209 RFPL3SP0C7P2 107 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms