RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ARMC4Q5T2S8 1044 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ANKRD20A1Q5TYW2 823 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ANKRD20A3Q5VUR7 823 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ZNF324BQ6AW86 544 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 WDR73Q6P4I2 378 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 UNC5DQ6UXZ4 953 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 GBP6Q6ZN66 633 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 MDGA2Q7Z553 956 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 SPATA19Q7Z5L4 167 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 HOOK3Q86VS8 718 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 CLYBLQ8N0X4 340 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ABHD11Q8NFV4 315 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 PDLIM5Q96HC4 596 aaKnown RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 SERAC1Q96JX3 654 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ZNF830Q96NB3 372 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 AGAP3Q96P47 875 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 BBS4Q96RK4 519 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 TRIM2Q9C040 744 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 NUAK2Q9H093 628 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 Q9N2J8 555 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 KCNJ16Q9NPI9 418 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ASNSD1Q9NWL6 643 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 PAG1Q9NWQ8 432 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 ARMCX3Q9UH62 379 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 TBK1Q9UHD2 729 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 HOOK1Q9UJC3 728 aaKnown RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 EXO1Q9UQ84 846 aaKnown RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 LSM4Q9Y4Z0 139 aaKnown RBP2.91□□□□□ -1.94
CSDE1-209ENST00000525132 RNF215Q9Y6U7 377 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 PTPRCP08575 1304 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 FANCIQ9NVI1 1328 aa2.91□□□□□ -1.94
CSDE1-209ENST00000525132 A0A1W2PPR1 153 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 GSTTP1A0A1W2PQM5 241 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ARL5CA6NH57 179 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ANXA2P2A6NMY6 339 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 CLIC1O00299 241 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 UBFD1O14562 309 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 NDC80O14777 642 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 TXNL1O43396 289 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PLRG1O43660 514 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 SLC25A17O43808 307 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PRPSAP2O60256 369 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 LMX1BO60663 402 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 REM1O75628 298 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 TRUB2O95900 331 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 MT-CYBP00156 380 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ENO1P06733 434 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PLEKP08567 350 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 HOXB5P09067 269 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 HOXB7P09629 217 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 CTPS1P17812 591 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 UGT1A4P22310 534 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PTPN3P26045 913 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ZNF84P51523 738 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 CLDN2P57739 230 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 HOXA4Q00056 320 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 TFAP4Q01664 338 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 SRSF4Q08170 494 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PIGHQ14442 188 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 LASP1Q14847 261 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ZNF77Q15935 545 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ME3Q16798 604 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PCGF3Q3KNV8 242 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 CBWD6Q4V339 395 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 GLE1Q53GS7 698 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 CBWD3Q5JTY5 395 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 CC2D1BQ5T0F9 858 aaKnown RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 LRIF1Q5T3J3 769 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 SLC8B1Q6J4K2 584 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 TMEM270Q6UE05 265 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ARSKQ6UWY0 536 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ABRAXAS1Q6UWZ7 409 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 IGFL3Q6UXB1 125 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PPP1R21Q6ZMI0 780 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 TRIM72Q6ZMU5 477 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 SPATA21Q7Z572 469 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 HAPLN4Q86UW8 402 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 KLHL7Q8IXQ5 586 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 PEX5LQ8IYB4 626 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 TMEM217Q8N7C4 229 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 BCORP1Q8N888 145 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 TERB1Q8NA31 727 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 C8orf58Q8NAV2 365 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 LMX1AQ8TE12 382 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ADAMTS16Q8TE57 1224 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 LPGAT1Q92604 370 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 N4BP2L2Q92802 583 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 CORO2AQ92828 525 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 MOAP1Q96BY2 351 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 C16orf45Q96MC5 204 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 FCRL4Q96PJ5 515 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 ZNF347Q96SE7 839 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 SEPT5Q99719 369 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 DDA1Q9BW61 102 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 IFT27Q9BW83 186 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 C1QTNF5Q9BXJ0 243 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 C1QTNF7Q9BXJ2 289 aa2.9□□□□□ -1.95
CSDE1-209ENST00000525132 RNF26Q9BY78 433 aaPredicted RBP2.9□□□□□ -1.95
CSDE1-209ENST00000525132 C1orf21Q9H246 121 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms