RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 MKL2Q9ULH7 1088 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 PCDHGB7Q9Y5F8 929 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 FAM208BQ5VWN6 2430 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 PCSK5Q92824 1860 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 ZNF860A6NHJ4 632 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 G3V2L1 256 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 PSMD12O00232 456 aaPredicted RBP11.85□□□□□ -0.51
VEGFA-225ENST00000523950 FFAR3O14843 346 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 GPR42O15529 346 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 CHST10O43529 356 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 ALOX12BO75342 701 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 SCELO95171 688 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 HPP00738 406 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 FHP07954 510 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 C8orf89P0DMQ9 161 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 PTX3P26022 381 aaPredicted RBP11.85□□□□□ -0.51
VEGFA-225ENST00000523950 FOXL2P58012 376 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 DNAJB13P59910 316 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 AP2B1P63010 937 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 BTN3A2P78410 334 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 CBX1P83916 185 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 IFT88Q13099 833 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 AIMP2Q13155 320 aaKnown RBP11.85□□□□□ -0.51
VEGFA-225ENST00000523950 CUL3Q13618 768 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 ZRSR2Q15696 482 aaKnown RBP11.85□□□□□ -0.51
VEGFA-225ENST00000523950 CPSF6Q16630 551 aaKnown RBP eCLIP11.85□□□□□ -0.51
VEGFA-225ENST00000523950 MINDY4Q4G0A6 757 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 UNC50Q53HI1 259 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 DEPDC1Q5TB30 811 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
VEGFA-225ENST00000523950 CPZQ66K79 652 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 ADNP2Q6IQ32 1131 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 KIRREL2Q6UWL6 708 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 LRIG3Q6UXM1 1119 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 QSOX2Q6ZRP7 698 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 MILR1Q7Z6M3 343 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 LAPTM4BQ86VI4 370 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 PRSS58Q8IYP2 241 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 IQCKQ8N0W5 287 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 C4orf33Q8N1A6 199 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 BANPQ8N9N5 519 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 CCDC63Q8NA47 563 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 PLPP5Q8NEB5 264 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 OR4F6Q8NGB9 312 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 OR11G2Q8NGC1 345 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 OR5T3Q8NGG3 340 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 PEX11GQ96HA9 241 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 NSUN5Q96P11 429 aaKnown RBP11.85□□□□□ -0.51
VEGFA-225ENST00000523950 QRFPRQ96P65 431 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 SMC6Q96SB8 1091 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 ZNF382Q96SR6 550 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 VN1R1Q9GZP7 353 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 SLC25A18Q9H1K4 315 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 ATP13A2Q9NQ11 1180 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 FBXL4Q9UKA2 621 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 RNF11Q9Y3C5 154 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 LOC400499M0QZD8 3231 aa11.85□□□□□ -0.51
VEGFA-225ENST00000523950 BLACEA4D250 179 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 MAGEB17A8MXT2 336 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 FOXO6A8MYZ6 492 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 C4orf51C9J302 202 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 RGS16O15492 202 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-225ENST00000523950 SEMA3DO95025 777 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 TGFB1P01137 390 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 CPA3P15088 417 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 PLA2G16P53816 162 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 CDH13P55290 713 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 PKNOX1P55347 436 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 RAB38P57729 211 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 ZNF33BQ06732 778 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 ASPHQ12797 758 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 LCP2Q13094 533 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 DDX39BQ13838 428 aaKnown RBP11.84□□□□□ -0.51
VEGFA-225ENST00000523950 LY6DQ14210 128 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 MFSD4BQ5TF39 518 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 FRG2Q64ET8 278 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 TTC19Q6DKK2 380 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-225ENST00000523950 TCTN3Q6NUS6 607 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 SRRM1Q8IYB3 904 aaKnown RBP11.84□□□□□ -0.51
VEGFA-225ENST00000523950 CA13Q8N1Q1 262 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 C7orf57Q8NEG2 295 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 RGMAQ96B86 450 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 ABHD17AQ96GS6 310 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 CDK15Q96Q40 435 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 FRG2BQ96QU4 278 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 F2RL3Q96RI0 385 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 SERPINI1Q99574 410 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 SLC25A23Q9BV35 468 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 TRIM55Q9BYV6 548 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 SLC29A3Q9BZD2 475 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 ACBD3Q9H3P7 528 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 LYRM4Q9HD34 91 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 MLXIPLQ9NP71 852 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 PRDM7Q9NQW5 492 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 LANCL2Q9NS86 450 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 RIC8BQ9NVN3 520 aa11.84□□□□□ -0.51
VEGFA-225ENST00000523950 SNX6Q9UNH7 406 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms