RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IL18BPO95998 194 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 APOC2P02655 101 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 TMEM253P0C7T8 217 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 OPRM1P35372 400 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 HSD17B2P37059 387 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 COILP38432 576 aaPredicted RBP12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 ADARP55265 1226 aaKnown RBP12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 GBX1Q14549 363 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 HERC3Q15034 1050 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 TERF2Q15554 542 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 BBS12Q6ZW61 710 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 ASPGQ86U10 573 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 LRRC56Q8IYG6 542 aaPredicted RBP12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 FBXO15Q8NCQ5 510 aaPredicted RBP12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 NEIL3Q8TAT5 605 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 NCLNQ969V3 563 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 SCYL1Q96KG9 808 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 FERMT1Q9BQL6 677 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 CCDC77Q9BR77 488 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 P2RY12Q9H244 342 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 ZNF703Q9H7S9 590 aaPredicted RBP12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 LRRC40Q9H9A6 602 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 SACM1LQ9NTJ5 587 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 MYOTQ9UBF9 498 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 ATG4BQ9Y4P1 393 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 HEATR5AQ86XA9 2040 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 CTIFO43310 598 aaKnown RBP12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 SPRY1O43609 319 aaPredicted RBP12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 STK10O94804 968 aaKnown RBP12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 B3GALT4O96024 378 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 RFPL3SP0C7P2 107 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 CCL3P10147 92 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 ACVR1Q04771 509 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 DEFB134Q4QY38 66 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 NSUN5P2Q63ZY6 315 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 CDKL3Q8IVW4 592 aaPredicted RBP12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 ZNF740Q8NDX6 193 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 SLC13A3Q8WWT9 602 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 SGCZQ96LD1 299 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 AMBRA1Q9C0C7 1298 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 ACKR4Q9NPB9 350 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 SAMD15Q9P1V8 674 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 ZFATQ9P243 1243 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 MARCH4Q9P2E8 410 aaPredicted RBP12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 NDRG3Q9UGV2 375 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 FREM3P0C091 2139 aa12.77□□□□□ -0.37
NKX3-1-202ENST00000523261 MBD3L3A6NE82 208 aaPredicted RBP12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 WWP2O00308 870 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 LCMT2O60294 686 aaKnown RBP12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 P04436 131 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 COMTP21964 271 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 HRH2P25021 359 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 CTNNA2P26232 953 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 ATP5DP30049 168 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 SLC1A1P43005 524 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 TSTD2Q5T7W7 516 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 THEMIS2Q5TEJ8 643 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 CAPN13Q6MZZ7 669 aaPredicted RBP12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 MBD3L2Q8NHZ7 208 aaPredicted RBP12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 ACTL9Q8TC94 416 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 NTNG2Q96CW9 530 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 ZNF778Q96MU6 729 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 NAP1L5Q96NT1 182 aaPredicted RBP12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 HEMGNQ9BXL5 484 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 FAM114A2Q9NRY5 505 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 RIMKLBQ9ULI2 386 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 MGAM2Q2M2H8 2515 aa12.76□□□□□ -0.37
NKX3-1-202ENST00000523261 A0A1B0GTH6 734 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 CD8B2A6NJW9 211 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 A8MV72 311 aaPredicted RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 PSTPIP1O43586 416 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 SPOPO43791 374 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 CATP04040 527 aaKnown RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 SLC35G6P0C7Q6 338 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 RBP3P10745 1247 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 ALOX12P18054 663 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 PIGAP37287 484 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 TRPC1P48995 793 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 TTPAP49638 278 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 CRYZQ08257 329 aaKnown RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 AARS2Q5JTZ9 985 aaKnown RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 WIPI1Q5MNZ9 446 aaPredicted RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 CTSL3PQ5NE16 218 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 HECTD2Q5U5R9 776 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 RBM43Q6ZSC3 357 aaKnown RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 LUZP2Q86TE4 346 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 LRRC25Q8N386 305 aaPredicted RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 LIX1Q8N485 282 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 SREK1Q8WXA9 508 aaKnown RBP12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 PIK3IP1Q96FE7 263 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms