RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 RBM48Q5RL73 367 aaKnown RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 RNF220Q5VTB9 566 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 TMEM17Q86X19 198 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC22A8Q8TCC7 542 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 C1orf226A1L170 272 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 DFNA5O60443 496 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 NOS1APO75052 506 aaPredicted RBP15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 MAGP20916 626 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 LMO3Q8TAP4 145 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 TMCO6Q96DC7 493 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 BORCS6Q96GS4 357 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 RBCK1Q9BYM8 510 aa15.67■□□□□ 0.1
PCDHA3-201ENST00000522353 AKAP12Q02952 1782 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 A0A1W2PRQ8 180 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 BHMG1C9JSJ3 638 aaPredicted RBP15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 GGT5P36269 586 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 GSK3BP49841 420 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 HHEXQ03014 270 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 PLCXD2Q0VAA5 305 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 TRAM2Q15035 370 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 SPATS1Q496A3 300 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 TMEM35AQ53FP2 167 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 TMEM225Q6GV28 225 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 BBS10Q8TAM1 723 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 THRSPQ92748 146 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 HCRTR2O43614 444 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 F7P08709 466 aaPredicted RBP15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 ITGA3P26006 1051 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 OR12D2P58182 307 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 NPTX1Q15818 432 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 MSS51Q4VC12 460 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 NCEH1Q6PIU2 408 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 TSACCQ96A04 125 aaPredicted RBP15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 MGAT4AQ9UM21 535 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 LIPT1Q9Y234 373 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 EFCAB9A8MZ26 197 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 GADD45AP24522 165 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 AZGP1P25311 298 aaKnown RBP15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 SPINT3P49223 89 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 CYP27C1Q4G0S4 372 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 APCDD1Q8J025 514 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 YIPF7Q8N8F6 280 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 NALCNQ8IZF0 1738 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 TBX1O43435 398 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 URB1O60287 2271 aaKnown RBP15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 FPR1P21462 350 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 NR4A1P22736 598 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 KCNC4Q03721 635 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 PUDPQ08623 228 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF542PQ5EBM4 170 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 UNC5DQ6UXZ4 953 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 CCDC116Q8IYX3 515 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 MCHR1Q99705 422 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 GAL3ST1Q99999 423 aa15.66■□□□□ 0.1
PCDHA3-201ENST00000522353 ORC5O43913 435 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 ARL6IP5O75915 188 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 RAB36O95755 333 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 C8BP07358 591 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 IFI30P13284 250 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 SLC6A4P31645 630 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CD70P32970 193 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 DPP6P42658 865 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 LRIF1Q5T3J3 769 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 OR52E8Q6IFG1 317 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 NOXRED1Q6NXP6 359 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 RNF130Q86XS8 419 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 GALNT12Q8IXK2 581 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 DNAJA4Q8WW22 397 aaPredicted RBP15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 STOML2Q9UJZ1 356 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 DNMT3AQ9Y6K1 912 aaPredicted RBP15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 PROZP22891 400 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CST5P28325 142 aaPredicted RBP15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 GALK1P51570 392 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 DSC1Q08554 894 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF554Q86TJ5 538 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 C15orf40Q8WUR7 153 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 TTYH1Q9H313 450 aaPredicted RBP15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 GRXCR1A8MXD5 290 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 H0YJX3 145 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 GPR37L1O60883 481 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CDC123O75794 336 aaPredicted RBP15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 RORCP51449 518 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 TBPL1P62380 186 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 ACY1Q03154 408 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 ZNF101Q8IZC7 436 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CANT1Q8WVQ1 401 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 SCRN2Q96FV2 425 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 IL4I1Q96RQ9 567 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 B3GNT4Q9C0J1 378 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 PPP4R1LQ9P1A2 415 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 FABP12A6NFH5 140 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 TMEM189-UBE2V1I3L0A0 370 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CREG1O75629 220 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 EDNRAP25101 427 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CXCL12P48061 93 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 ARSFP54793 590 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CTBP2P56545 445 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 ABCA11PQ4W5N1 156 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 TPRG1LQ5T0D9 272 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms