RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ROGDIQ9GZN7 287 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 TXLNGQ9NUQ3 528 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 TMEM45AQ9NWC5 275 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 MYO15AQ9UKN7 3530 aa20.31■□□□□ 0.84
R3HCC1-208ENST00000522012 DMDP11532 3685 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 A0A0A6YYD5 115 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 TMPRSS11DO60235 418 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 SMIM10L1P0DMW3 83 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 ALOX12P18054 663 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 PRPS1L1P21108 318 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 CALB2P22676 271 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 CERS1P27544 350 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 TSFMP43897 325 aaKnown RBP20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 CLNS1AP54105 237 aaKnown RBP20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 MTTPP55157 894 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 SLAMF1Q13291 335 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 SLC9A5Q14940 896 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 SPRED3Q2MJR0 410 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 BLOC1S3Q6QNY0 202 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 SLITRK4Q8IW52 837 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 TMEM132CQ8N3T6 1108 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 SMIM10Q96HG1 83 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 MYNNQ9NPC7 610 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 CFAP54Q96N23 3096 aa20.3■□□□□ 0.84
R3HCC1-208ENST00000522012 A0A088AWK7 358 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 OR2B3O76000 313 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 ZNF10P21506 573 aaPredicted RBP20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 ZFP36L2P47974 494 aaKnown RBP20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 C2orf80Q0P641 193 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 NDUFA9Q16795 377 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 VPS26BQ4G0F5 336 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 YTHDF3Q7Z739 585 aaKnown RBP20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 ZCCHC7Q8N3Z6 543 aaKnown RBP20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 GLB1L3Q8NCI6 653 aaPredicted RBP20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 TM4SF18Q96CE8 201 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 SLC25A23Q9BV35 468 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 CLMPQ9H6B4 373 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 FANCEQ9HB96 536 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 FGF21Q9NSA1 209 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 SERTAD3Q9UJW9 196 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 SLC22A7Q9Y694 548 aa20.29■□□□□ 0.84
R3HCC1-208ENST00000522012 HYKKA2RU49 373 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 CCDC154A6NI56 674 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 PRMT3O60678 531 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 RFPL3O75679 317 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 ATP5HO75947 161 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 UNC5CO95185 931 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 IL3P08700 152 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 FAM58BPP0C7Q3 252 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 IL1RNP18510 177 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 HPCAL1P37235 193 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 DGKQP52824 942 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 STX5Q13190 355 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 RCAN2Q14206 197 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 GRM7Q14831 915 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 PGS1Q32NB8 556 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 LACTB2Q53H82 288 aaPredicted RBP20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 B3GNT8Q7Z7M8 397 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 PIP4P1Q86T03 277 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 RIMKLAQ8IXN7 391 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 TTC29Q8NA56 475 aaPredicted RBP20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 OR1L3Q8NH93 324 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 SPDL1Q96EA4 605 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 SERINC2Q96SA4 455 aa20.28■□□□□ 0.84
R3HCC1-208ENST00000522012 B3GALT2O43825 422 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 COX7A2P14406 83 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 CAPN3P20807 821 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 MNAT1P51948 309 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 TRA2BP62995 288 aaKnown RBP20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 E2F1Q01094 437 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 FOXK2Q01167 660 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 MC1RQ01726 317 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 ACY1Q03154 408 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 ZFP36L1Q07352 338 aaKnown RBP20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 ILKQ13418 452 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 TRA2AQ13595 282 aaKnown RBP eCLIP20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 FAM174BQ3ZCQ3 159 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 MMEL1Q495T6 779 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 FAM71E1Q6IPT2 247 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 RBM44Q6ZP01 1051 aaKnown RBP20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 IKBIPQ70UQ0 350 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 PRSS41Q7RTY9 318 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 GPR135Q8IZ08 494 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 ARHGEF39Q8N4T4 335 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 STARD8Q92502 1023 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 VPS33AQ96AX1 596 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 ANKHQ9HCJ1 492 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 FBXW2Q9UKT8 454 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 WBP11Q9Y2W2 641 aaKnown RBP20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 NAALAD2Q9Y3Q0 740 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 COL5A1P20908 1838 aaPredicted RBP20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 HEATR5BQ9P2D3 2071 aa20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 SNRNP200O75643 2136 aaKnown RBP20.27■□□□□ 0.84
R3HCC1-208ENST00000522012 RALGAPA1Q6GYQ0 2036 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 ZNF860A6NHJ4 632 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 AIM2O14862 343 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 ANGPT2O15123 496 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 SCAMP2O15127 329 aaKnown RBP20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms