RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ACSF3Q4G176 576 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 SYTL3Q4VX76 610 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 NDUFAF5Q5TEU4 345 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 SUSD1Q6UWL2 747 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 ABHD13Q7L211 337 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 MAATS1Q7Z4T9 603 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 TMEM156Q8N614 296 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 OR5T3Q8NGG3 340 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 EPS8L3Q8TE67 593 aaKnown RBP8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 UBASH3BQ8TF42 649 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 TFB1MQ8WVM0 346 aaKnown RBP8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 ISL2Q96A47 359 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 SARAFQ96BY9 339 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 LRRC46Q96FV0 321 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 PEX11GQ96HA9 241 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 MEGF10Q96KG7 1140 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 MARK4Q96L34 752 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 FSD1LQ9BXM9 530 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 REG4Q9BYZ8 158 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 LIN28AQ9H9Z2 209 aaKnown RBP8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 UBTD1Q9HAC8 227 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 NLE1Q9NVX2 485 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 KLHL8Q9P2G9 620 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 R3HDM2Q9Y2K5 976 aaKnown RBP8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 WIF1Q9Y5W5 379 aa8.18□□□□□ -1.1
TRAPPC9-212ENST00000521944 NINQ8N4C6 2090 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 TRGV5A0A0B4J1U4 118 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 TMEM238LA0A1B0GVL6 79 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 SAGE2PA6NJ88 616 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 A8MV72 311 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 ACOT7O00154 380 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 CES2O00748 559 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 HAT1O14929 419 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 CTIFO43310 598 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 DYRK3O43781 588 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 ZNF354AO60765 605 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 PHF2O75151 1096 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 VPS26AO75436 327 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 RFPL3SP0C7P2 107 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 ERGP11308 486 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 FPR1P21462 350 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 AOAHP28039 575 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 CMPK1P30085 196 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 FOXN2P32314 431 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 GPR143P51810 404 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 DYNLT1P63172 113 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 BTG2P78543 158 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 PRDX1Q06830 199 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 ITIH4Q14624 930 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 SLC10A1Q14973 349 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 ZNF750Q32MQ0 723 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 CCDC38Q502W7 563 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 AGGF1Q8N302 714 aaeCLIP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 SYN2Q92777 582 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 RAD51AP1Q96B01 352 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 C10orf88Q9H8K7 445 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 IL1RL2Q9HB29 575 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 MRPS30Q9NP92 439 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 GALNT8Q9NY28 637 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 PCYOX1Q9UHG3 505 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 TTC7AQ9ULT0 858 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 MYO6Q9UM54 1294 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 TESMINQ9Y4I5 508 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 PCDHGB3Q9Y5G1 929 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 YLPM1P49750 1951 aaKnown RBP8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 MALRD1Q5VYJ5 2156 aa8.17□□□□□ -1.1
TRAPPC9-212ENST00000521944 IGKV3D-11A0A0A0MRZ8 115 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 TRBV11-1A0A0K0K1C0 115 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 MEGF11A6BM72 1044 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 ZNF860A6NHJ4 632 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 EEF1E1-BLOC1S5C9J1V9 151 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 TXNDC9O14530 226 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 EEF1E1O43324 174 aaKnown RBP8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 HCN1O60741 890 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 OR2J2O76002 312 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 B3GALT4O96024 378 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 RPN2P04844 631 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 OR56A5P0C7T3 313 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 EZRP15311 586 aaKnown RBP8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 CNR1P21554 472 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 THBS2P35442 1172 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 TNNT3P45378 269 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 DNASE1L1P49184 302 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 FOXF2Q12947 444 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 SPARCL1Q14515 664 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 NDUFA9Q16795 377 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 PDLIM3Q53GG5 364 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 FDX2Q6P4F2 183 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 C22orf34Q6ZV56 151 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 VSIG1Q86XK7 387 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 KRT222Q8N1A0 295 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 KCT2Q8NC54 265 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 ASZ1Q8WWH4 475 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 RERGQ96A58 199 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 WFIKKN1Q96NZ8 548 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 OR1F2PQ96R84 312 aa8.16□□□□□ -1.1
TRAPPC9-212ENST00000521944 FAM173AQ9BQD7 235 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms