RNA–Protein interactions for RNA: ENST00000521767.1

UBR5-211, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-211	ENST00000521767	RPL3	P39023	403 aa	Known RBP	12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	MPL	P40238	635 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	TSFM	P43897	325 aa	Known RBP	12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	GSTM5	P46439	218 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	WNT3	P56703	355 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	RAB8A	P61006	207 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	TRA2B	P62995	288 aa	Known RBP	12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	GPLD1	P80108	840 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	CEACAM7	Q14002	265 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	CCDC6	Q16204	474 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	PIGG	Q5H8A4	983 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	MANEA	Q5SRI9	462 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	ANKRD26P1	Q6NSI1	321 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	R3HCC1L	Q7Z5L2	792 aa	Known RBP	12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	HPS6	Q86YV9	775 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	DNAJC22	Q8N4W6	341 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	EID2	Q8N6I1	236 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	DNAJB8	Q8NHS0	232 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	DNAJB14	Q8TBM8	379 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	MTERF3	Q96E29	417 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	ITCH	Q96J02	903 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	DUSP26	Q9BV47	211 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	GTPBP2	Q9BX10	602 aa	Known RBP	12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	KCNH6	Q9H252	994 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	FAM120C	Q9NX05	1096 aa	Known RBP	12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	SH3BP4	Q9P0V3	963 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	PACSIN3	Q9UKS6	424 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	PCDHGA5	Q9Y5G8	931 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767		R4GN57	208 aa		12.75	□□□□□ -0.37
UBR5-211	ENST00000521767	IGHV5-51	A0A0C4DH38	117 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767		A8MUI8	341 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	P2RX6	O15547	441 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	DUX1	O43812	170 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	PCDHGA12	O60330	932 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SCN2B	O60939	215 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SORBS2	O94875	1100 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	EIF2S1	P05198	315 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ZNF888	P0CJ79	500 aa	Predicted RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SMIM10L1	P0DMW3	83 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	PNLIP	P16233	465 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SLC6A2	P23975	617 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	CD1C	P29017	333 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SLC7A2	P52569	658 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	NUBP1	P53384	320 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	KLC1	Q07866	573 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SLAMF1	Q13291	335 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	PDE7A	Q13946	482 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SLC9A5	Q14940	896 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	AMZ1	Q400G9	498 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ZC3H12B	Q5HYM0	836 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	C6orf10	Q5SRN2	563 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ZC3H14	Q6PJT7	736 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	USP53	Q70EK8	1073 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	DGLUCY	Q7Z3D6	616 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	PLXDC1	Q8IUK5	500 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	MCAT	Q8IVS2	390 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SLC15A3	Q8IY34	581 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ZNF655	Q8N720	491 aa	Predicted RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ACOT4	Q8N9L9	421 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	OR8K5	Q8NH50	307 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	UTP15	Q8TED0	518 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	CCDC74A	Q96AQ1	378 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SMIM10	Q96HG1	83 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SMOC1	Q9H4F8	434 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SERHL	Q9NQF3	203 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ATAD3A	Q9NVI7	634 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	RAB23	Q9ULC3	237 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	MAN2B2	Q9Y2E5	1009 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	PCDHA9	Q9Y5H5	950 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SPTB	P11277	2137 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	LY6G6E	A0A0G2JKS1	128 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	PRSS51	A0A1B0GVH4	220 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	CPED1	A4D0V7	1026 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	TNFRSF10A	O00220	468 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	KHNYN	O15037	678 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ZSCAN9	O15535	394 aa	Predicted RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	HCRTR1	O43613	425 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SRPX2	O60687	465 aa	Predicted RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ERN1	O75460	977 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	FAM58BP	P0C7Q3	252 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ENG	P17813	658 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ME2	P23368	584 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	VSX2	P58304	361 aa	Predicted RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	BTN3A2	P78410	334 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	CFHR1	Q03591	330 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	HEPACAM	Q14CZ8	416 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SAMD4B	Q5PRF9	694 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	WASHC2D	Q5SRD0	308 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	MRM1	Q6IN84	353 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	NANOGP8	Q6NSW7	305 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	NET1	Q7Z628	596 aa	Predicted RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	SPRED1	Q7Z699	444 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ANKRD46	Q86W74	232 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	KIAA2013	Q8IYS2	634 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	CARF	Q8N187	725 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	CSNK1A1L	Q8N752	337 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	RNF148	Q8N7C7	305 aa		12.74	□□□□□ -0.37
UBR5-211	ENST00000521767	VPS37A	Q8NEZ2	397 aa		12.74	□□□□□ -0.37

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