RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CENPLQ8N0S6 344 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 SIRT6Q8N6T7 355 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 MAPK1IP1LQ8NDC0 245 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 FAM13CQ8NE31 585 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 GPR150Q8NGU9 434 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 MAGEC3Q8TD91 643 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 NSMCE1Q8WV22 266 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 SCYL1Q96KG9 808 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 SMIM14Q96QK8 99 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 CD180Q99467 661 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 MIPEPQ99797 713 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 BTBD10Q9BSF8 475 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 CCDC106Q9BWC9 280 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 CADM1Q9BY67 442 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 HES7Q9BYE0 225 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 WWP1Q9H0M0 922 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 LRTM1Q9HBL6 345 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 IFT80Q9P2H3 777 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 WDR37Q9Y2I8 494 aa6.9□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC35F4A4IF30 521 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 OR5K3A6NET4 321 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 OR51F1A6NGY5 319 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 NPIPB15A6NHN6 443 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 TMEM114B3SHH9 223 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 GSC2O15499 205 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 DLX3O60479 287 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 HNRNPCL1O60812 293 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 CCDC22O60826 627 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 APOA4P06727 396 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ENO1P06733 434 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 SERPINA6P08185 405 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 CELA2AP08217 269 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 MSL3P1P0C860 447 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 COL6A2P12110 1019 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ALOX15P16050 662 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 PAMP19021 973 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 RPL10P27635 214 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 CPA2P48052 419 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 CD151P48509 253 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 CSNK1DP48730 415 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 RASSF2P50749 326 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 MNAT1P51948 309 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ALDH18A1P54886 795 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 RAB10P61026 200 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 DCDP81605 110 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 PMPCAQ10713 525 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 FLYWCH1Q4VC44 716 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 EMC4Q5J8M3 183 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 TMTC4Q5T4D3 741 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF648Q5T619 568 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ARMC3Q5W041 872 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF470Q6ECI4 717 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 TMEM211Q6ICI0 200 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 LRRC8EQ6NSJ5 796 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 LDB1Q86U70 411 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 CD163Q86VB7 1156 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 WDR75Q8IWA0 830 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 GHDCQ8N2G8 530 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 GPATCH11Q8N954 259 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 OR13J1Q8NGT2 312 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM57AQ8TBR7 257 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 PIWIL2Q8TC59 973 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM222BQ8WU58 562 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 STYXQ8WUJ0 223 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 AP2M1Q96CW1 435 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 RILPQ96NA2 401 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 FRMD6Q96NE9 622 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF599Q96NL3 588 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 PIP5K1AQ99755 562 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 OLFM1Q99784 485 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM167BQ9BTA0 163 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF160Q9HCG1 818 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 OXSMQ9NWU1 459 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 KCTD5Q9NXV2 234 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 TAS2R1Q9NYW7 299 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 MARCH4Q9P2E8 410 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 CPSF2Q9P2I0 782 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 DHCR7Q9UBM7 475 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 NDOR1Q9UHB4 597 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 ACOT9Q9Y305 439 aa6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 MRPS2Q9Y399 296 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-227ENST00000521387 PHF3Q92576 2039 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 CPAMD8Q8IZJ3 1885 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 CCDC162PA2VCL2 907 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 OR5H15A6NDH6 313 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 B2RBV5 119 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 E7EQ34 232 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 PSMD11O00231 422 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 BUD23O43709 281 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 NUAK1O60285 661 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SMPD2O60906 423 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 PEX11AO75192 247 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 H2AFYO75367 372 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 SOX30O94993 753 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 KLHL2O95198 593 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 WISP3O95389 354 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 HSPA4LO95757 839 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 CHRNGP07510 517 aa6.88□□□□□ -1.31
CTNNA1-227ENST00000521387 PIRTP0C851 137 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms