RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 KCTD11Q693B1 232 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 FAAP20Q6NZ36 180 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 SLC27A4Q6P1M0 643 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 MACC1Q6ZN28 852 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 C15orf52Q6ZUT6 534 aaKnown RBP4.09□□□□□ -1.75
PTPN12-214ENST00000520947 LPCAT1Q8NF37 534 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 OR5T2Q8NGG2 359 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 CD99L2Q8TCZ2 262 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 RNASE8Q8TDE3 154 aaKnown RBP4.09□□□□□ -1.75
PTPN12-214ENST00000520947 SEPT8Q92599 483 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 SNX21Q969T3 373 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 FAM46BQ96A09 425 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 OMA1Q96E52 524 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 AGAP3Q96P47 875 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 ZNF300Q96RE9 604 aaPredicted RBP4.09□□□□□ -1.75
PTPN12-214ENST00000520947 IL12RB2Q99665 862 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 HOXD1Q9GZZ0 328 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 MID1IP1Q9NPA3 183 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 SPHK2Q9NRA0 654 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 FBXW2Q9UKT8 454 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 PLCL2Q9UPR0 1127 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 SNX5Q9Y5X3 404 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 CSNK1G3Q9Y6M4 447 aa4.09□□□□□ -1.75
PTPN12-214ENST00000520947 CCDC162PA2VCL2 907 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 FAM149AA5PLN7 773 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 TRIM64A6NGJ6 449 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 TRIM64BA6NI03 449 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 NPIPB9F8W1W9 429 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 SURF4O15260 269 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 GRAP2O75791 330 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 TSFMP43897 325 aaKnown RBP4.08□□□□□ -1.76
PTPN12-214ENST00000520947 TEFQ10587 303 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 GRB14Q14449 540 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 RPS6KA1Q15418 735 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 IFI44LQ53G44 452 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 CES4AQ5XG92 561 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 ZNF613Q6PF04 617 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 PRSS42Q7Z5A4 293 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 TMEM99Q8N816 258 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 OR4D10Q8NGI6 311 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 ST7LQ8TDW4 575 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 BPIFA2Q96DR5 249 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 CCDC43Q96MW1 224 aaKnown RBP4.08□□□□□ -1.76
PTPN12-214ENST00000520947 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 FGFBP2Q9BYJ0 223 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 MTIF3Q9H2K0 278 aaKnown RBP4.08□□□□□ -1.76
PTPN12-214ENST00000520947 AKIRIN1Q9H9L7 192 aaPredicted RBP4.08□□□□□ -1.76
PTPN12-214ENST00000520947 ZNF510Q9Y2H8 683 aa4.08□□□□□ -1.76
PTPN12-214ENST00000520947 COL2A1P02458 1487 aaPredicted RBP4.07□□□□□ -1.76
PTPN12-214ENST00000520947 RPGRIP1LQ68CZ1 1315 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 BICDL2A1A5D9 508 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 C5orf51A6NDU8 294 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 M0R296 226 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 TLX2O43763 284 aaPredicted RBP4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CLN5O75503 358 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CEACAM4O75871 244 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 ZSCAN5DPP0CG00 497 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CTNNA2P26232 953 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 GJB2P29033 226 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 SLC1A3P43003 542 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CLCN4P51793 760 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 UCP2P55851 309 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 LMO4P61968 165 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 IRX4P78413 519 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 SLC3A1Q07837 685 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 RPA4Q13156 261 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 ENPP2Q13822 863 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CEACAM7Q14002 265 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 MAPK11Q15759 364 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 C2orf76Q3KRA6 126 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 SPANXN4Q5MJ08 99 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 BSPRYQ5W0U4 402 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 TCEAL6Q6IPX3 200 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 RAPH1Q70E73 1250 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CHMP1BQ7LBR1 199 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 TMEM126BQ8IUX1 230 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 LAX1Q8IWV1 398 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CCDC185Q8N715 623 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 CLEC1AQ8NC01 280 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 ZNF519Q8TB69 540 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 GGHQ92820 318 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 SLCO2A1Q92959 643 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 SLC35C1Q96A29 364 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 LURAP1Q96LR2 239 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 PCDHB18PQ96TA0 734 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 KRT12Q99456 494 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 RBM4BQ9BQ04 359 aaKnown RBP4.07□□□□□ -1.76
PTPN12-214ENST00000520947 MRPL9Q9BYD2 267 aaKnown RBP4.07□□□□□ -1.76
PTPN12-214ENST00000520947 C3orf14Q9HBI5 128 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 DNAJC11Q9NVH1 559 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 DBF4Q9UBU7 674 aaPredicted RBP4.07□□□□□ -1.76
PTPN12-214ENST00000520947 PSORS1C1Q9UIG5 152 aa4.07□□□□□ -1.76
PTPN12-214ENST00000520947 hCG_38984A0A1B0GV85 526 aa4.06□□□□□ -1.76
PTPN12-214ENST00000520947 C2orf92A0A1B0GVN3 265 aa4.06□□□□□ -1.76
PTPN12-214ENST00000520947 A0A1B0GVY2 172 aa4.06□□□□□ -1.76
PTPN12-214ENST00000520947 GTPBP10A4D1E9 387 aaKnown RBP4.06□□□□□ -1.76
PTPN12-214ENST00000520947 NKX6-3A6NJ46 265 aa4.06□□□□□ -1.76
PTPN12-214ENST00000520947 SRRM4A7MD48 611 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms