RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 AKIRIN1Q9H9L7 192 aaPredicted RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 PSD3Q9NYI0 1048 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 DCTN4Q9UJW0 460 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 PADI1Q9ULC6 663 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 RAXQ9Y2V3 346 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 GOLGA8QA0A0J9YX86 632 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 A0A1B0GX78 115 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 GOLGA8OA6NCC3 632 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 GOLGA8NF8WBI6 632 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 SLC28A1O00337 649 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 RTCAO00442 366 aaKnown RBP14.53□□□□□ -0.08
LSM1-203ENST00000520755 DSCR3O14972 297 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 KLK10O43240 276 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 SEMA3DO95025 777 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 ZNF888P0CJ79 500 aaPredicted RBP14.53□□□□□ -0.08
LSM1-203ENST00000520755 SMIM10L1P0DMW3 83 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 IDH3AP50213 366 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 CLN3Q13286 438 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 CUL3Q13618 768 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 NR6A1Q15406 480 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 NDUFA9Q16795 377 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 FAM199XQ6PEV8 388 aaPredicted RBP14.53□□□□□ -0.08
LSM1-203ENST00000520755 ZNF793Q6ZN11 406 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 LARP4Q71RC2 724 aaKnown RBP eCLIP14.53□□□□□ -0.08
LSM1-203ENST00000520755 PRSS41Q7RTY9 318 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 PROSER1Q86XN7 944 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 PROKR1Q8TCW9 393 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 UTP15Q8TED0 518 aaKnown RBP14.53□□□□□ -0.08
LSM1-203ENST00000520755 GAL3ST3Q96A11 431 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 C11orf24Q96F05 449 aaPredicted RBP14.53□□□□□ -0.08
LSM1-203ENST00000520755 SMIM10Q96HG1 83 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 LRFN5Q96NI6 719 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 GBP5Q96PP8 586 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 SERPINI1Q99574 410 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 TRIM55Q9BYV6 548 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 KLHL14Q9P2G3 628 aa14.53□□□□□ -0.08
LSM1-203ENST00000520755 A0A0G2JN53 185 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 TRPC5OSA6NMA1 111 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 TAF4O00268 1085 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 RRP8O43159 456 aaKnown RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 ERI3O43414 337 aaKnown RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 DIAPH2O60879 1101 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 TROVE2P10155 538 aaKnown RBP eCLIP14.52□□□□□ -0.09
LSM1-203ENST00000520755 AGXTP21549 392 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 PTX3P26022 381 aaPredicted RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 EIF2S3P41091 472 aaKnown RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 OR1D4P47884 311 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 EMP3P54852 163 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 RAE1P78406 368 aaKnown RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 ABHD18Q0P651 414 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 SLC9A5Q14940 896 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 KIAA0040Q15053 153 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 IMPG1Q17R60 797 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 TUBB8Q3ZCM7 444 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 GARNL3Q5VVW2 1013 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 ZNF385CQ66K41 422 aaPredicted RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 LCN10Q6JVE6 187 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 ABHD17CQ6PCB6 329 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 VASH2Q86V25 355 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 PDSS2Q86YH6 399 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 SHISA5Q8N114 240 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 METTL4Q8N3J2 472 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 C1orf52Q8N6N3 182 aaKnown RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 AMER3Q8N944 861 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 OR2L5Q8NG80 312 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 CT55Q8WUE5 264 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 CHTF18Q8WVB6 975 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 STON2Q8WXE9 905 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 FCRL1Q96LA6 429 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 QRFPRQ96P65 431 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 CCT7Q99832 543 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 C17orf62Q9BQA9 187 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 SIKE1Q9BRV8 207 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 TMEM120AQ9BXJ8 343 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 REXO4Q9GZR2 422 aaKnown RBP14.52□□□□□ -0.09
LSM1-203ENST00000520755 CHST8Q9H2A9 424 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 AKTIPQ9H8T0 292 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 VPS29Q9UBQ0 182 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 CROTQ9UKG9 612 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 MAU2Q9Y6X3 613 aa14.52□□□□□ -0.09
LSM1-203ENST00000520755 CROCCQ5TZA2 2017 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 A0A0A6YYC8 382 aaPredicted RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 A0A0G2JND7 137 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 LOC101059948A0A1B0GTJ6 334 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 I3L1I5 382 aaPredicted RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 RGS14O43566 566 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 FOXS1O43638 330 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 SNX3O60493 162 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 EEDO75530 441 aaKnown RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 KLHL18O94889 574 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 ALDOCP09972 364 aaKnown RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 IL1RNP18510 177 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 ITGAXP20702 1163 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 BSGP35613 385 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 DLSTP36957 453 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 STAT5AP42229 794 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 RAB8AP61006 207 aa14.51□□□□□ -0.09
LSM1-203ENST00000520755 STXBP1P61764 594 aaKnown RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 RPL38P63173 70 aaKnown RBP14.51□□□□□ -0.09
LSM1-203ENST00000520755 DCDP81605 110 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms