RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 WWTR1Q9GZV5 400 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 PELI2Q9HAT8 420 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 UPF2Q9HAU5 1272 aaKnown RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 FAM207AQ9NSI2 230 aaPredicted RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 FAM212BQ9NTI7 297 aaPredicted RBP3.65□□□□□ -1.83
SQLE-204ENST00000520493 PIGVQ9NUD9 493 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 AATFQ9NY61 560 aaKnown RBP eCLIP3.65□□□□□ -1.83
SQLE-204ENST00000520493 IL36AQ9UHA7 158 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 GRID1Q9ULK0 1009 aa3.65□□□□□ -1.83
SQLE-204ENST00000520493 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 GLRA3O75311 464 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 DFFBO76075 338 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 YES1P07947 543 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 SP9P0CG40 484 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 CPA3P15088 417 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 CYP3A5P20815 502 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 IFNAR2P48551 515 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 HNMTP50135 292 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 CDH11P55287 796 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 HUNKP57058 714 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 SSTP61278 116 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 HMGN5P82970 282 aaKnown RBP3.64□□□□□ -1.83
SQLE-204ENST00000520493 ELP6Q0PNE2 266 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 OPCMLQ14982 345 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 CEP55Q53EZ4 464 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 TAF1BQ53T94 588 aaPredicted RBP3.64□□□□□ -1.83
SQLE-204ENST00000520493 CTR9Q6PD62 1173 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 ARSKQ6UWY0 536 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 G2E3Q7L622 706 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 SLC16A9Q7RTY1 509 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 CDK20Q8IZL9 346 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 EID3Q8N140 333 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 TMEM99Q8N816 258 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 LEMD2Q8NC56 503 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 FAM71CQ8NEG0 241 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 FAM46BQ96A09 425 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 RAB7BQ96AH8 199 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 DTNBP1Q96EV8 351 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 NDNQ99608 321 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 SSX3Q99909 188 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 ASCL2Q99929 193 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 THUMPD2Q9BTF0 503 aaKnown RBP3.64□□□□□ -1.83
SQLE-204ENST00000520493 NACAP1Q9BZK3 213 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 TRPV6Q9H1D0 765 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 TFB2MQ9H5Q4 396 aaKnown RBP3.64□□□□□ -1.83
SQLE-204ENST00000520493 COQ10BQ9H8M1 238 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 SLC12A6Q9UHW9 1150 aa3.64□□□□□ -1.83
SQLE-204ENST00000520493 DISP3Q9P2K9 1392 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 A0A087WZY1 265 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 ANKDD1BA6NHY2 528 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 SLC15A5A6NIM6 579 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 GPR89AB7ZAQ6 455 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 IDH1O75874 414 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 OR6A2O95222 327 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 CAVIN2O95810 425 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 GAS8O95995 478 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 AK1P00568 194 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 AMBPP02760 352 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 RAF1P04049 648 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 GPR89BP0CG08 455 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 TSPY4P0CV99 314 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 TSPY10P0CW01 314 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 TPBGLP0DKB5 382 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 NCF1P14598 390 aaPredicted RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 ALDH4A1P30038 563 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 NSFP46459 744 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 SLC6A12P48065 614 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 TRA2BP62995 288 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 RPP38P78345 283 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 SLC3A1Q07837 685 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 SPP2Q13103 211 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 GK2Q14410 553 aaPredicted RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 CEBPEQ15744 281 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 TECRLQ5HYJ1 363 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 TTC27Q6P3X3 843 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 CEACAM20Q6UY09 585 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 SIGLEC15Q6ZMC9 328 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 CPEB2Q7Z5Q1 589 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 RTN4RL2Q86UN3 420 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 AMZ2Q86W34 360 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 RNF148Q8N7C7 305 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 OR56B1Q8NGI3 324 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 DQX1Q8TE96 717 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 SLC5A11Q8WWX8 675 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 ULK4Q96C45 1275 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 GUCD1Q96NT3 240 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 GPA33Q99795 319 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 PRMT1Q99873 361 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 RBM4Q9BWF3 364 aaKnown RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 FTHL17Q9BXU8 183 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 FAM49AQ9H0Q0 323 aaPredicted RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 RIMS4Q9H426 269 aaPredicted RBP3.63□□□□□ -1.83
SQLE-204ENST00000520493 RNF121Q9H920 327 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 CENPMQ9NSP4 180 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 EXOC1Q9NV70 894 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 TMOD2Q9NZR1 351 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 NUDCQ9Y266 331 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 WDR37Q9Y2I8 494 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 SH3GLB1Q9Y371 365 aa3.63□□□□□ -1.83
SQLE-204ENST00000520493 IGHV4-61A0A0C4DH41 118 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms