RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CTNNAL1Q9UBT7 734 aa14.19□□□□□ -0.14
CSMD1-207ENST00000520451 MEMO1Q9Y316 297 aa14.19□□□□□ -0.14
CSMD1-207ENST00000520451 OTOGQ6ZRI0 2925 aa14.19□□□□□ -0.14
CSMD1-207ENST00000520451 PCNX1Q96RV3 2341 aa14.19□□□□□ -0.14
CSMD1-207ENST00000520451 A0A0G2JN53 185 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 TRBV11-1A0A0K0K1C0 115 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 ZNHIT1O43257 154 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 H2AFYO75367 372 aaKnown RBP14.18□□□□□ -0.14
CSMD1-207ENST00000520451 C1GALT1C1LP0DN25 315 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 GNAZP19086 355 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 AGAP20933 346 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 TRHRP34981 398 aaPredicted RBP14.18□□□□□ -0.14
CSMD1-207ENST00000520451 GDF5P43026 501 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 SLBPQ14493 270 aaKnown RBP eCLIP14.18□□□□□ -0.14
CSMD1-207ENST00000520451 RNFT1Q5M7Z0 435 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 GDF7Q7Z4P5 450 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 ZNF227Q86WZ6 799 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 CREG2Q8IUH2 290 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 CEP97Q8IW35 865 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 GAL3ST3Q96A11 431 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 PDLIM2Q96JY6 352 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 KCNF1Q9H3M0 494 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 TRIM45Q9H8W5 580 aaPredicted RBP14.18□□□□□ -0.14
CSMD1-207ENST00000520451 GPAMQ9HCL2 828 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 MOCS1Q9NZB8 636 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 MMACHCQ9Y4U1 282 aa14.18□□□□□ -0.14
CSMD1-207ENST00000520451 NCF1BA6NI72 391 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 NCF1CA8MVU1 366 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 ERI3O43414 337 aaKnown RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 MYO1DO94832 1006 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 NCF1P14598 390 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 ELAVL4P26378 380 aaKnown RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 HNRNPH1P31943 449 aaKnown RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 SLC6A12P48065 614 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 CLCN2P51788 898 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 SLC12A2P55011 1212 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 TMIGD1Q6UXZ0 262 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 SLCO4C1Q6ZQN7 724 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 CAPN12Q6ZSI9 719 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 NCCRP1Q6ZVX7 275 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 APCDD1LQ8NCL9 501 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 B3GNT7Q8NFL0 401 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 TTLQ8NG68 377 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 AGAP11Q8TF27 550 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 RHBDF1Q96CC6 855 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 RHOJQ9H4E5 214 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 PNO1Q9NRX1 252 aaKnown RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 NSMCE4AQ9NXX6 385 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 FBXW2Q9UKT8 454 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 KLF13Q9Y2Y9 288 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-207ENST00000520451 PKDREJQ9NTG1 2253 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 DCHS2Q6V1P9 2916 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 CSMD2Q7Z408 3487 aa14.17□□□□□ -0.14
CSMD1-207ENST00000520451 EFCAB8A8MWE9 144 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 E7ESA3 106 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 TFECO14948 347 aaPredicted RBP14.16□□□□□ -0.14
CSMD1-207ENST00000520451 TP73O15350 636 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 PIAS1O75925 651 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 CLDN14O95500 239 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 PPP2R1BP30154 601 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 PTGER1P34995 402 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 RFC3P40938 356 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 MEOX1P50221 254 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 GNG11P61952 73 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 RUNX2Q13950 521 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 CDSNQ15517 529 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 TERF2Q15554 542 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 C3P1Q6ZMU1 363 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 CHERPQ8IWX8 916 aaKnown RBP14.16□□□□□ -0.14
CSMD1-207ENST00000520451 SCUBE1Q8IWY4 988 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 KLHDC8AQ8IYD2 350 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 ZBED8Q8IZ13 594 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 KRT78Q8N1N4 520 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 ARMC10Q8N2F6 343 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 TMEM156Q8N614 296 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 FAM47BQ8NA70 645 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 POGLUT1Q8NBL1 392 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 MTFMTQ96DP5 389 aaKnown RBP14.16□□□□□ -0.14
CSMD1-207ENST00000520451 MS4A6EQ96DS6 147 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 NPLQ9BXD5 320 aaPredicted RBP14.16□□□□□ -0.14
CSMD1-207ENST00000520451 POPDC3Q9HBV1 291 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 PRTFDC1Q9NRG1 225 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 WWOXQ9NZC7 414 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 ADGRG4Q8IZF6 3080 aa14.16□□□□□ -0.14
CSMD1-207ENST00000520451 NCOA6Q14686 2063 aaPredicted RBP14.15□□□□□ -0.14
CSMD1-207ENST00000520451 A0A088AWK7 358 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 LRIT2A6NDA9 550 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 USP27XA6NNY8 438 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 TGFBR3LH3BV60 316 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 CCDC188H7C350 402 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 C19orf84I3L1E1 186 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 CLDN4O14493 209 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 PRRG2O14669 202 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 B3GALT2O43825 422 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 ITGA10O75578 1167 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 ZNF10P21506 573 aaPredicted RBP14.15□□□□□ -0.14
CSMD1-207ENST00000520451 GSTM2P28161 218 aa14.15□□□□□ -0.14
CSMD1-207ENST00000520451 RPL21P46778 160 aaKnown RBP14.15□□□□□ -0.14
CSMD1-207ENST00000520451 HNRNPFP52597 415 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms