RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 KCNK13Q9HB14 408 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 TBK1Q9UHD2 729 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 ZNF180Q9UJW8 692 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 SCN2AQ99250 2005 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 BAHCC1Q9P281 2608 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 LOC102723996A0A087X1L8 192 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 IQANK1A0A1B0GTG1 560 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 LRIT2A6NDA9 550 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 GOLGA8RI6L899 631 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 PRAMEF4O60810 478 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 TGFB1P01137 390 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 EPORP19235 508 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 CD22P20273 847 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 MAOAP21397 527 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 CERS1P27544 350 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 SSR2P43308 183 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 SOX8P57073 446 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 BTG2P78543 158 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 FOXK1P85037 733 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 RHAGQ02094 409 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 ZNF33BQ06732 778 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 SLC13A2Q13183 592 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 MFAP5Q13361 173 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 SLC29A2Q14542 456 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 PLEKHN1Q494U1 663 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-221ENST00000520265 CRB2Q5IJ48 1285 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 ABHD17BQ5VST6 288 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 PRAMEF9Q5VWM5 478 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 B3GNTL1Q67FW5 361 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-221ENST00000520265 FCRLBQ6BAA4 426 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 GRHL2Q6ISB3 625 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 RIPOR1Q6ZS17 1223 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 GOLGA7Q7Z5G4 137 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 CA13Q8N1Q1 262 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 OR2L5Q8NG80 312 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 CENPKQ9BS16 269 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 LANCL2Q9NS86 450 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 PLA2G3Q9NZ20 509 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 PSMC3IPQ9P2W1 217 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-221ENST00000520265 TEKT2Q9UIF3 430 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 ZNF490Q9ULM2 529 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-221ENST00000520265 MRPS33Q9Y291 106 aaKnown RBP13.34□□□□□ -0.27
VEGFA-221ENST00000520265 TNPO3Q9Y5L0 923 aaKnown RBP13.34□□□□□ -0.27
VEGFA-221ENST00000520265 CSAG2Q9Y5P2 127 aa13.34□□□□□ -0.27
VEGFA-221ENST00000520265 CCDC189A1A4V9 331 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 MAGEB17A8MXT2 336 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 SORBS2O94875 1100 aaKnown RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 CYC1P08574 325 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 MTHFD2P13995 350 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 PIK3CGP48736 1102 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 CCNG1P51959 295 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 MTTPP55157 894 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 NAA30Q147X3 362 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 INPP5JQ15735 1006 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 TBCCQ15814 346 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 EXT1Q16394 746 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 TTC19Q6DKK2 380 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 CHSY3Q70JA7 882 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 VN1R5Q7Z5H4 357 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 CLNKQ7Z7G1 428 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 CISD2Q8N5K1 135 aaKnown RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 PPP4R1Q8TF05 950 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 MTBPQ96DY7 904 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 KCNC2Q96PR1 638 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 MTERF1Q99551 399 aaKnown RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 SLC29A3Q9BZD2 475 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 IPPKQ9H8X2 491 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 PNO1Q9NRX1 252 aaKnown RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 ABI3Q9P2A4 366 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 TMCO1Q9UM00 188 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 SPACA6W5XKT8 324 aa13.33□□□□□ -0.28
VEGFA-221ENST00000520265 GCN1Q92616 2671 aaKnown RBP13.33□□□□□ -0.28
VEGFA-221ENST00000520265 RTCAO00442 366 aaKnown RBP13.32□□□□□ -0.28
VEGFA-221ENST00000520265 CLDN4O14493 209 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 COL6A2P12110 1019 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 TAC1P20366 129 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 MAGEA12P43365 314 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 SLCO1A2P46721 670 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 RAB38P57729 211 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 TAS2R50P59544 299 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 RUNX2Q13950 521 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 RCN2Q14257 317 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 ZNF169Q14929 603 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-221ENST00000520265 AP5B1Q2VPB7 878 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 CUZD1Q86UP6 607 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 RNF175Q8N4F7 328 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 Q8NA96 180 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 SRFBP1Q8NEF9 429 aaKnown RBP13.32□□□□□ -0.28
VEGFA-221ENST00000520265 OR7G3Q8NG95 312 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 SUN3Q8TAQ9 357 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 MIB2Q96AX9 1013 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 REPS1Q96D71 796 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 WDR34Q96EX3 536 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 CMTM7Q96FZ5 175 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 GPR78Q96P69 363 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 CDK15Q96Q40 435 aa13.32□□□□□ -0.28
VEGFA-221ENST00000520265 SERINC2Q96SA4 455 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms