RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 A0A1B0GVT2 93 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 C10orf142B7Z368 130 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 TAF4O00268 1085 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 CDX4O14627 284 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 LDLRAD4O15165 306 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 PSTPIP1O43586 416 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 MFSD11O43934 449 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 SYF2O95926 243 aaKnown RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 HEXAP06865 529 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 ARSBP15848 533 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 CD53P19397 219 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 NUDT1P36639 197 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 HSPA9P38646 679 aaKnown RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 GARSP41250 739 aaKnown RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 RGRP47804 291 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 CSNK1DP48730 415 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 CDH12P55289 794 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 P2RX3P56373 397 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 C21orf59P57076 290 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 RPS21P63220 83 aaKnown RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 GBE1Q04446 702 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 GRIK2Q13002 908 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 TFDP2Q14188 446 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 SETMARQ53H47 684 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 SLC45A4Q5BKX6 768 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 DCAF12L2Q5VW00 463 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 IL27RAQ6UWB1 636 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 MFSD7Q6UXD7 560 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 HORMAD1Q86X24 394 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 KATNAL2Q8IYT4 538 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 RCOR2Q8IZ40 523 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 CCNYQ8ND76 341 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 KIAA1524Q8TCG1 905 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 HCAR2Q8TDS4 363 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 TMEM18Q96B42 140 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 SKA1Q96BD8 255 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 RNF183Q96D59 192 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF641Q96N77 438 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF830Q96NB3 372 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-208ENST00000520228 TSGA13Q96PP4 275 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 DESI2Q9BSY9 194 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 HEMGNQ9BXL5 484 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 LHPPQ9H008 270 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 SLC25A18Q9H1K4 315 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 ATP13A3Q9H7F0 1226 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 EBF2Q9HAK2 575 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 C20orf141Q9NUB4 165 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 HEY1Q9Y5J3 304 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 FADS3Q9Y5Q0 445 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 SPTBN4Q9H254 2564 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 MACROD2A1Z1Q3 448 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 IGLON5A6NGN9 336 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 B4DGG1 531 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 PRAMEF26H0Y7S4 382 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 VILLO15195 856 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 SLC31A1O15431 190 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 GJB3O75712 270 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 NEBLO76041 1014 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 PIGNO95427 931 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 LCATP04180 440 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 CCNB1P14635 433 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 PRLRP16471 622 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 CCNCP24863 283 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 FMO4P31512 558 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 AKT2P31751 481 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 CDKN2BP42772 138 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 SUOXP51687 545 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 CLDN2P57739 230 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 ZP1P60852 638 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 AP1S1P61966 158 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 POLR2LP62875 67 aaKnown RBP6.73□□□□□ -1.33
SDCBP-208ENST00000520228 DYNLT1P63172 113 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 BNC1Q01954 994 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 BCL2L1Q07817 233 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 FAM27E3Q08E93 113 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 SGCGQ13326 291 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 HNRNPDQ14103 355 aaKnown RBP6.73□□□□□ -1.33
SDCBP-208ENST00000520228 PDK1Q15118 436 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 TAZQ16635 292 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 UGP2Q16851 508 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 KIF19Q2TAC6 998 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF284Q2VY69 593 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 HLA-BQ31612 363 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 LRRC73Q5JTD7 316 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 SEL1L3Q68CR1 1132 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 KIAA1161Q6NSJ0 714 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 BRAT1Q6PJG6 821 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 BZW1Q7L1Q6 419 aaKnown RBP6.73□□□□□ -1.33
SDCBP-208ENST00000520228 TECPR1Q7Z6L1 1165 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 CCDC50Q8IVM0 306 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 PGBD5Q8N414 524 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 MINDY1Q8N5J2 469 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 TEX26Q8N6G2 289 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 CCDC112Q8NEF3 446 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 KLK6Q92876 244 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 RBM41Q96IZ5 413 aaKnown RBP6.73□□□□□ -1.33
SDCBP-208ENST00000520228 NUDCD1Q96RS6 583 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 LGMNQ99538 433 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 MGME1Q9BQP7 344 aa6.73□□□□□ -1.33
SDCBP-208ENST00000520228 SLC17A9Q9BYT1 436 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms