RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 DUSP21Q9H596 190 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ELOVL6Q9H5J4 265 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 SLC6A13Q9NSD5 602 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 GPATCH2Q9NW75 528 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ARL15Q9NXU5 204 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 RPS6KA6Q9UK32 745 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PSME2Q9UL46 239 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CDC14AQ9UNH5 594 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CORO2BQ9UQ03 480 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 RUVBL1Q9Y265 456 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 PCDHGA8Q9Y5G5 932 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CORINQ9Y5Q5 1042 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 C1orf226A1L170 272 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ARHGEF33A8MVX0 844 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 EVPLLA8MZ36 301 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 H0YC42 278 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 SLC1A7O00341 560 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 FOXE1O00358 373 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 RNASET2O00584 256 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 RFXANKO14593 260 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 SCAMP2O15127 329 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 TBX19O60806 448 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PQBP1O60828 265 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 GABARAPO95166 117 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 EPN2O95208 641 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 KCNK5O95279 499 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 SERPINA1P01009 418 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 LRG1P02750 347 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CKMP06732 381 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ZGLP1P0C6A0 271 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 BMP7P18075 431 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CCNA2P20248 432 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CD22P20273 847 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 EFNA1P20827 205 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 MATN1P21941 496 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 TACR1P25103 407 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PTX3P26022 381 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 RPL10P27635 214 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 ELK4P28324 431 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 HOXA9P31269 272 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 KDELR2P33947 212 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PCGF2P35227 344 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PIGAP37287 484 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ARL1P40616 181 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 CDKN2CP42773 168 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 STK19P49842 368 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 TPD52P55327 224 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 CCL23P55773 120 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 WDR5P61964 334 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 CSNK2BP67870 215 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 RAE1P78406 368 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 HTRA4P83105 476 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 MVKQ03426 396 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 TLE2Q04725 743 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 RBBP4Q09028 425 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 RIPPLY1Q0D2K3 151 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PDE7AQ13946 482 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ARHGEF7Q14155 803 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ZNF77Q15935 545 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CTU2Q2VPK5 515 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 SPIN4Q56A73 249 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 OTUD3Q5T2D3 398 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 SYT6Q5T7P8 510 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 ANXA8L1Q5VT79 327 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 GPR107Q5VW38 600 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 OR2T5Q6IEZ7 315 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ANKRD26P1Q6NSI1 321 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CES5AQ6NT32 575 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 GCNT7Q6ZNI0 430 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 TMEM26Q6ZUK4 368 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PRSS48Q7RTY5 328 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 R3HCC1LQ7Z5L2 792 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 RBM23Q86U06 439 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 VRK3Q8IV63 474 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ZDHHC21Q8IVQ6 265 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 MCATQ8IVS2 390 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 ZC3H7AQ8IWR0 971 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 LAS2Q8IYD9 372 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PHACTR4Q8IZ21 702 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 SLC22A15Q8IZD6 547 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CMTM8Q8IZV2 173 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CHST14Q8NCH0 376 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 OR2A12Q8NGT7 310 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 OR2T29Q8NH02 315 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 FBXO30Q8TB52 745 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.85□□□□□ -1.63
SDC2-204ENST00000519914 WFIKKN2Q8TEU8 576 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ZFP90Q8TF47 636 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 CHTF18Q8WVB6 975 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 BTN2A2Q8WVV5 523 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ASZ1Q8WWH4 475 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 TRUB1Q8WWH5 349 aaKnown RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 VMP1Q96GC9 406 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 ZNF764Q96H86 408 aaPredicted RBP4.85□□□□□ -1.63
SDC2-204ENST00000519914 MRGPRX3Q96LB0 322 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 DACH2Q96NX9 599 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 HBEGFQ99075 208 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 EPYCQ99645 322 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 P2RY13Q9BPV8 354 aa4.85□□□□□ -1.63
SDC2-204ENST00000519914 HEPHQ9BQS7 1158 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms