RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ATG101Q9BSB4 218 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 LSG1Q9H089 658 aaKnown RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 UPF3AQ9H1J1 476 aaKnown RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 TUFT1Q9NNX1 390 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 B3GAT2Q9NPZ5 323 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 HPF1Q9NWY4 346 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 NOCTQ9UK39 431 aaKnown RBP3.11□□□□□ -1.91
VPS13B-207ENST00000518569 COLEC10Q9Y6Z7 277 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 KIF13AQ9H1H9 1805 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 RNF123Q5XPI4 1314 aa3.11□□□□□ -1.91
VPS13B-207ENST00000518569 NCAPD3P42695 1498 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 BAZ1BQ9UIG0 1483 aaKnown RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 DCAF1Q9Y4B6 1507 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 TSPOAP1O95153 1857 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ANTXRLA6NF34 631 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 KRTAP16-1A8MUX0 517 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 NPIPB9F8W1W9 429 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 H0YC42 278 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 H3BMM5 538 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 RTCAO00442 366 aaKnown RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 SUPT20HL2P0C7V6 817 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 CCNCP24863 283 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 FRKP42685 505 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 OR3A1P47881 315 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 RPP38P78345 283 aaKnown RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 DMTNQ08495 405 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 TYSND1Q2T9J0 566 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD20A4Q4UJ75 823 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 C2CD6Q53TS8 623 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD20A8PQ5CZ79 823 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD20A2Q5SQ80 823 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD20A1Q5TYW2 823 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD20A3Q5VUR7 823 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 PLBD1Q6P4A8 553 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 C3P1Q6ZMU1 363 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 C15orf52Q6ZUT6 534 aaKnown RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 STXBP4Q6ZWJ1 553 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 CROCCP3Q8IVE0 287 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 CARNMT1Q8N4J0 409 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 CCDC185Q8N715 623 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 TMEM99Q8N816 258 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 UBLCP1Q8WVY7 318 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 SNRNP40Q96DI7 357 aaKnown RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 AGAP4Q96P64 663 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 GSDMAQ96QA5 445 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 PRMT1Q99873 361 aaKnown RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 C5orf66Q9H5L9 145 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 YY1AP1Q9H869 796 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 COPS7BQ9H9Q2 264 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 C6orf203Q9P0P8 240 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 POLKQ9UBT6 870 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ARMCX3Q9UH62 379 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-207ENST00000518569 MOSPD1Q9UJG1 213 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 GPR132Q9UNW8 380 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 LIPT1Q9Y234 373 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ATP6V0A2Q9Y487 856 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 PFASO15067 1338 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 PIK3R4Q99570 1358 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 PRDM2Q13029 1718 aa3.1□□□□□ -1.91
VPS13B-207ENST00000518569 ATAD2BQ9ULI0 1458 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 hCG_38984A0A1B0GV85 526 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 E5RGE8 158 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 K7EQD1 137 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 SOCS3O14543 225 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TFECO14948 347 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 PGRMC2O15173 223 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 IDH3BO43837 385 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TSC22D2O75157 780 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 E2F6O75461 281 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 RAD51DO75771 328 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 SLU7O95391 586 aaKnown RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 MT-ND2P03891 347 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 DLATP10515 647 aaKnown RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 KRT5P13647 590 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 FERP16591 822 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 CCND3P30281 292 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 HSD17B7P56937 341 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 FOLH1Q04609 750 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 ELAVL2Q12926 359 aaKnown RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 LY6DQ14210 128 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 SYCP1Q15431 976 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 PKN2Q16513 984 aaKnown RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 KIF26BQ2KJY2 2108 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TAF1BQ53T94 588 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF542PQ5EBM4 170 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF789Q5FWF6 425 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TCEAL6Q6IPX3 200 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 IRGCQ6NXR0 463 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 DOK6Q6PKX4 331 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 LCLAT1Q6UWP7 414 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 UNC5DQ6UXZ4 953 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 LINC00696Q6ZRV3 163 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TRMT11Q7Z4G4 463 aaKnown RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 ZFAND4Q86XD8 727 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 SIAH3Q8IW03 269 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TEX26Q8N6G2 289 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 UXS1Q8NBZ7 420 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 ZNF485Q8NCK3 441 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 ANKRD20A12PQ8NF67 263 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms