RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 LARP4BQ92615 738 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 USP7Q93009 1102 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM143Q96AN5 459 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF669Q96BR6 464 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RRNAD1Q96FB5 475 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF558Q96NG5 402 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CAMK1GQ96NX5 476 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MUS81Q96NY9 551 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 WDFY2Q96P53 400 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FYTTD1Q96QD9 318 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2A14Q96R47 310 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 STRBPQ96SI9 672 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GAD1Q99259 594 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZBTB18Q99592 522 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RBM4BQ9BQ04 359 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 EBF4Q9BQW3 602 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 EDEM2Q9BV94 578 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RBM4Q9BWF3 364 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FTHL17Q9BXU8 183 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 DGCR6LQ9BY27 220 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRIM2Q9C040 744 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 NKX6-2Q9C056 277 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 THAP2Q9H0W7 228 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SDCBP2Q9H190 292 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 C2orf40Q9H1Z8 148 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MED28Q9H204 178 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TTYH1Q9H313 450 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZBTB26Q9HCK0 441 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MRPL47Q9HD33 250 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ALG13Q9NP73 1137 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 NT5MQ9NPB1 228 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 XPNPEP3Q9NQH7 507 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 DDX4Q9NQI0 724 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMLHEQ9NVH6 421 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MARCH2Q9P0N8 246 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 NFKBIL1Q9UBC1 381 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 METTL1Q9UBP6 276 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEFF2Q9UIK5 374 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 NUDT5Q9UKK9 219 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CA14Q9ULX7 337 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ERVW-1Q9UQF0 538 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CDYLQ9Y232 598 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MROH1Q8NDA8 1641 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM205AQ6ZU69 1335 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF142P52746 1687 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SPATA31D1Q6ZQQ2 1576 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RIMS1Q86UR5 1692 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TEX13CA0A0J9YWL9 993 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A1B0GTL3 188 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPS10-NUDT3A0A1W2PQS6 291 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A1W2PQU0 124 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC22A23A1A5C7 686 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RRN3P2A6NIE6 340 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 WASHC1A8K0Z3 465 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 A8MXE2 369 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 B4DXG7 233 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 D6RAR5 112 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 H7C4K7 107 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 GSTA4O15217 222 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 HSPA12AO43301 675 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SELENOFO60613 162 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 NBNO60934 754 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TIPRLO75663 272 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CBR3O75828 277 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PEX11BO96011 259 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 GLUD1P00367 558 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 C9P02748 559 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 HEXAP06865 529 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACAA1P09110 424 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CLTBP09497 229 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR52Z1P0C646 297 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNF224P0DH78 156 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CBSLP0DN79 551 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 FCER1AP12319 257 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MLNP12872 115 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNH1P13489 461 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 NCF1P14598 390 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TYRP14679 529 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DNASE1P24855 282 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 STOMP27105 288 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PSMB9P28065 219 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SDHAP31040 664 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAPK4P31152 587 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CCR7P32248 378 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CA5AP35218 305 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTPN7P35236 360 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CBSP35520 551 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CEACAM6P40199 344 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAPK9P45984 424 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CRKLP46109 303 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 NRIP1P48552 1158 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 INPP1P49441 399 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAN2A2P49641 1150 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 HNMTP50135 292 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPL14P50914 215 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ATP4BP51164 291 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CCR9P51686 369 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LIMK2P53671 638 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAPK10P53779 464 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 NHLH2Q02577 135 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms