RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 CLN6Q9NWW5 311 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 CNOT2Q9NZN8 540 aaKnown RBP11.86□□□□□ -0.51
PCM1-203ENST00000517545 SH3BP4Q9P0V3 963 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 FTSJ1Q9UET6 329 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 PRAMEF33A0A0G2JMD5 474 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 PRAMEF10O60809 474 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 HBQ1P09105 142 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 NKX3-2P78367 333 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 ACSM2AQ08AH3 577 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 LARS2Q15031 903 aaKnown RBP11.86□□□□□ -0.51
PCM1-203ENST00000517545 ACSM2BQ68CK6 577 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 GPR26Q8NDV2 337 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 OR4A15Q8NGL6 344 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 SUN5Q8TC36 379 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 DNMT3AQ9Y6K1 912 aaPredicted RBP11.86□□□□□ -0.51
PCM1-203ENST00000517545 ZAR1LA6NP61 321 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 SMAD6O43541 496 aaKnown RBP11.86□□□□□ -0.51
PCM1-203ENST00000517545 CDRT1O95170 752 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 SOX14O95416 240 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 SNRPD2P62316 118 aaKnown RBP11.86□□□□□ -0.51
PCM1-203ENST00000517545 RUNX1T1Q06455 604 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 ASAH1Q13510 395 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 DUSP7Q16829 419 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 LIPKQ5VXJ0 399 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 GLB1LQ6UWU2 654 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 VWA5B2Q8N398 1253 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 YIPF7Q8N8F6 280 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 GPR156Q8NFN8 814 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 SNAPC3Q92966 411 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 TMEM203Q969S6 136 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 FRMD6Q96NE9 622 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 TOR4AQ9NXH8 423 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 CARD8Q9Y2G2 431 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 HCN4Q9Y3Q4 1203 aa11.86□□□□□ -0.51
PCM1-203ENST00000517545 A0A1W2PQL4 384 aaPredicted RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 NPIPB8E9PQR5 432 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ZNF670-ZNF695F2Z2N8 137 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 PLA2G10O15496 165 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 LRRTM2O43300 516 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 COCHO43405 550 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 AKR7A2O43488 359 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 STC2O76061 302 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 CCNYL3P0C7X3 344 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 JUPP14923 745 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 CBLP22681 906 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 PSMA1P25786 263 aaKnown RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 RAE1P78406 368 aaKnown RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 IRF8Q02556 426 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SPHARQ15513 63 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 CDKN3Q16667 212 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ZNF385BQ569K4 471 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 FRMPD2BQ6IN97 320 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ARMCX6Q7L4S7 300 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 RTN4RL1Q86UN2 441 aaPredicted RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 LAS2Q8IYD9 372 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 C1orf52Q8N6N3 182 aaKnown RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 MED30Q96HR3 178 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 WDFY2Q96P53 400 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SLC12A9Q9BXP2 914 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 RNF121Q9H920 327 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 DNAJC11Q9NVH1 559 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SLC45A1Q9Y2W3 748 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 TRPM7Q96QT4 1865 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 VWA8A3KMH1 1905 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ZSCAN5BA6NJL1 495 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 PRMT3O60678 531 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 TMCC2O75069 709 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ZNF780AO75290 641 aaPredicted RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 HIST1H2AGP0C0S8 130 aaPredicted RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 HIST1H2ADP20671 130 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 CRISP1P54107 249 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 HNRNPA0Q13151 305 aaKnown RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 SLC35F1Q5T1Q4 408 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SAXO2Q658L1 398 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ELMOD2Q8IZ81 293 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 NLGN4YQ8NFZ3 816 aaPredicted RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 WFDC5Q8TCV5 224 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 TRIM63Q969Q1 353 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 REPS1Q96D71 796 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 DIRAS2Q96HU8 199 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 HIST1H2AHQ96KK5 128 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 HIST1H2AJQ99878 128 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 H2AFJQ9BTM1 129 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 NMNAT1Q9HAN9 279 aaPredicted RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 FAM8A1Q9UBU6 413 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SH3D21A4FU49 640 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SLC35F4A4IF30 521 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 C2orf78A6NCI8 922 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 FABP12A6NFH5 140 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SLC38A8A6NNN8 435 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SMLR1H3BR10 107 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 GADD45GO95257 159 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ALPPP05187 535 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 IDSP22304 550 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 GPC1P35052 558 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 CCL23P55773 120 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 PFN3P60673 137 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms