RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 KRTCAP2Q8N6L1 136 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ASCC1Q8N9N2 400 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C19orf18Q8NEA5 215 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PROKR2Q8NFJ6 384 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OR56A3Q8NH54 315 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LILRB4Q8NHJ6 448 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CLHC1Q8NHS4 586 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CXorf40AQ8TE69 158 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SETD7Q8WTS6 366 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FRS2Q8WU20 508 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ACOT12Q8WYK0 555 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HTRA1Q92743 480 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 UFD1Q92890 307 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RPL3LQ92901 407 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ESAMQ96AP7 390 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KCTD12Q96CX2 325 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OTUB2Q96DC9 234 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CHFRQ96EP1 664 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZBED6CLQ96FA7 236 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MED8Q96G25 268 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MRPL48Q96GC5 212 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZNF486Q96H40 463 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZC3HAV1LQ96H79 300 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TMEM80Q96HE8 168 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TMEM169Q96HH4 297 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C7orf34Q96L11 122 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KCTD7Q96MP8 289 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FAM129BQ96TA1 746 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HBEGFQ99075 208 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PHOX2BQ99453 314 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FEVQ99581 238 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TCF25Q9BQ70 676 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC35A5Q9BS91 424 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CCM2Q9BSQ5 444 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SYT17Q9BSW7 474 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 BTBD2Q9BX70 525 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 BBS2Q9BXC9 721 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RAB11FIP5Q9BXF6 653 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GON7Q9BXV9 100 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 POLR2J2Q9GZM3 115 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 POLR2J3Q9H1A7 115 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CHST8Q9H2A9 424 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TNKS2Q9H2K2 1166 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CRISPLD1Q9H336 500 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DPEP2Q9H4A9 486 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ANKRD19PQ9H560 264 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SUV39H2Q9H5I1 410 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 IKZF5Q9H5V7 419 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NIPAL2Q9H841 368 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NT5DC2Q9H857 520 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ANKRA2Q9H9E1 313 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CARS2Q9HA77 564 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RC3H2Q9HBD1 1191 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SGK2Q9HBY8 427 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 A4GALTQ9NPC4 353 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PAK6Q9NQU5 681 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 STARD7Q9NQZ5 370 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ASAH2Q9NR71 780 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MRPL17Q9NRX2 175 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 INIPQ9NRY2 104 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RASSF1Q9NS23 344 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FARSBQ9NSD9 589 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DDX28Q9NUL7 540 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TRMT13Q9NUP7 481 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MED17Q9NVC6 651 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TAS2R7Q9NYW3 318 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 STMN3Q9NZ72 180 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CALML5Q9NZT1 146 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SH3BP4Q9P0V3 963 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 COPZ2Q9P299 210 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TBC1D14Q9P2M4 693 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GMPR2Q9P2T1 348 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DNMT3BQ9UBC3 853 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 P2RX2Q9UBL9 471 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DKK3Q9UBP4 350 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KLF15Q9UIH9 416 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KLHL21Q9UJP4 597 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KCND3Q9UK17 655 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ADAM29Q9UKF5 820 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC13A4Q9UKG4 626 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 POLHQ9Y253 713 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC22A14Q9Y267 594 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DLGAP4Q9Y2H0 992 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FCF1Q9Y324 198 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 EXOSC1Q9Y3B2 195 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 YIPF1Q9Y548 306 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ASB1Q9Y576 335 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PCDHGA3Q9Y5H0 932 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PCDHGA2Q9Y5H1 932 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OR51B4Q9Y5P0 310 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HEMK1Q9Y5R4 338 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MAGED1Q9Y5V3 778 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MTCL1Q9Y4B5 1905 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DENND4AQ7Z401 1863 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CCDC88CQ9P219 2028 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C17orf113A0A1B0GUU1 675 aa3.23□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 A0A1W2PRQ8 180 aa3.23□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TMEM129A0AVI4 362 aa3.23□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TSPAN11A1L157 253 aa3.23□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PIPSLA2A3N6 862 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms