RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 GBF1Q92538 1859 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 RPAP1Q9BWH6 1393 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 EFCAB7A8K855 629 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 DNASE2O00115 360 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 PES1O00541 588 aaKnown RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 IMPA2O14732 288 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 FRAT2O75474 233 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 SUPT7LO94864 414 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 CDRT1O95170 752 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 MPZL1O95297 269 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 GJB5O95377 273 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 HOXB5P09067 269 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 THRBP10828 461 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 GABRR1P24046 479 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 CRYBA2P53672 197 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 ST8SIA6P61647 398 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 EFNB1P98172 346 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 RASGEF1BQ0VAM2 473 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 TRPC3Q13507 836 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 ODF4Q2M2E3 257 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 CXorf66Q5JRM2 361 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 ATP1A1-AS1Q5TC04 95 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 NUP54Q7Z3B4 507 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 NUFIP2Q7Z417 695 aaKnown RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 VSIG1Q86XK7 387 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM71E2Q8N5Q1 922 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 OR5M9Q8NGP3 310 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 OR1P1Q8NH06 330 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 GSDMBQ8TAX9 411 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 ESR2Q92731 530 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 TMEM101Q96IK0 257 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 CEP170P1Q96L14 293 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 IL12RB2Q99665 862 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 H2AFJQ9BTM1 129 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLKQ9H2G2 1235 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 SP140LQ9H930 580 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 HHATLQ9HCP6 504 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 AMBNQ9NP70 447 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 MTMR10Q9NXD2 777 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 SPHK1Q9NYA1 384 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 DDX20Q9UHI6 824 aaKnown RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 ELF5Q9UKW6 265 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 A4GNTQ9UNA3 340 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 GTF3C3Q9Y5Q9 886 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 POMT1Q9Y6A1 747 aa-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 DIDO1Q9BTC0 2240 aaKnown RBP-1.58□□□□□ -2.66
RNU6-539P-201ENST00000516665 A0A0G2JN53 185 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM237AA0A1B0GTK4 181 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 BCLAF3A2AJT9 711 aaKnown RBP-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 H0Y3Z8 333 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 SNAP23O00161 211 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 STX16O14662 325 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 NCK2O43639 380 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 JRKO75564 520 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 TIMP1P01033 207 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 SBK2P0C263 348 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 RARGP13631 454 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 ADRB3P13945 408 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 UQCRC2P22695 453 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 CD1BP29016 333 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 CDAP32320 146 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 DLSTP36957 453 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 GABRB2P47870 512 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 GNAQP50148 359 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 DPYSQ14117 519 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 EFR3AQ14156 821 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 CD226Q15762 336 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 TATDN1Q6P1N9 297 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 MSANTD1Q6ZTZ1 278 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC24A5Q71RS6 500 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 MOB1BQ7L9L4 216 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 LAX1Q8IWV1 398 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 ARHGAP24Q8N264 748 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 MAGEB6Q8N7X4 407 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 PPFIBP2Q8ND30 876 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 DUSP18Q8NEJ0 188 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 OR10H4Q8NGA5 316 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 OR51G1Q8NGK1 321 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF461Q8TAF7 563 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 KLF14Q8TD94 323 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 MTERF3Q96E29 417 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM81BQ96LP2 452 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 LBHD1Q9BQE6 289 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 EGLN3Q9H6Z9 239 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 COG4Q9H9E3 785 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 EPB41L5Q9HCM4 733 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 C1orf112Q9NSG2 853 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 OSER1Q9NX31 292 aa-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 NIP7Q9Y221 180 aaKnown RBP eCLIP-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-1.59□□□□□ -2.66
RNU6-539P-201ENST00000516665 IGF2RP11717 2491 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 PCDH11YQ9BZA8 1340 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 MAGEB2O15479 319 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 B4GALT5O43286 388 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 PLA2G6O60733 806 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 NPIPB7O75200 414 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 FGF18O76093 207 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 SLC25A27O95847 323 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 HTR1EP28566 365 aa-1.6□□□□□ -2.67
RNU6-539P-201ENST00000516665 ALDH3B1P43353 468 aa-1.6□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms