RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 FAM124BQ9H5Z6 455 aaPredicted RBP10.64□□□□□ -0.71
TRIM41-209ENST00000515834 ANKRA2Q9H9E1 313 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 DNAJC27Q9NZQ0 273 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 REV1Q9UBZ9 1251 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 SMIM30A4D0T7 59 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 RNF225M0QZC1 329 aaPredicted RBP10.64□□□□□ -0.71
TRIM41-209ENST00000515834 EDNRBP24530 442 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 HNRNPKP61978 463 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRIM41-209ENST00000515834 SLC44A3Q8N4M1 653 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 NATD1Q8N6N6 113 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 NSMAFQ92636 917 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 SMOC2Q9H3U7 446 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 C8orf33Q9H7E9 229 aaPredicted RBP10.64□□□□□ -0.71
TRIM41-209ENST00000515834 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 DPPA5A6NC42 116 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 MAP2K7O14733 419 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 CSTAP01040 98 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 PDYNP01213 254 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 SLC6A6P31641 620 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 OR8H3Q8N146 312 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 DAZLQ92904 295 aaKnown RBP10.64□□□□□ -0.71
TRIM41-209ENST00000515834 LRRC58Q96CX6 371 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 OR51I1Q9H343 314 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 NUFIP1Q9UHK0 495 aaKnown RBP10.64□□□□□ -0.71
TRIM41-209ENST00000515834 NOP16Q9Y3C1 178 aaKnown RBP10.64□□□□□ -0.71
TRIM41-209ENST00000515834 MANBAO00462 879 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 GRIA1P42261 906 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 MAGEA2P43356 314 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 RGS19P49795 217 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 CDH11P55287 796 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 FXYD6P3P58550 94 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 PAMR1Q6UXH9 720 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 SYNPOQ8N3V7 929 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 FOXJ1Q92949 421 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 PEX11GQ96HA9 241 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 PGAM5Q96HS1 289 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 C7orf26Q96N11 449 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 TSSK6Q9BXA6 273 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 AKTIPQ9H8T0 292 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 DNAJB9Q9UBS3 223 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 OR1A2Q9Y585 309 aa10.64□□□□□ -0.71
TRIM41-209ENST00000515834 A8MVJ9 347 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 HNF1BP35680 557 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 GRIA2P42262 883 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 DEFB134Q4QY38 66 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SLC2A7Q6PXP3 512 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SLC39A5Q6ZMH5 540 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 PLXDC1Q8IUK5 500 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 DCAF4L2Q8NA75 395 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 RFT1Q96AA3 541 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 DLGAP4Q9Y2H0 992 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 H0YJX3 145 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 RAD51DO75771 328 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 HSD3B1P14060 373 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ERI1Q8IV48 349 aaKnown RBP10.63□□□□□ -0.71
TRIM41-209ENST00000515834 CSNK1A1LQ8N752 337 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 G6PC3Q9BUM1 346 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 BCAS3Q9H6U6 928 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 CD207Q9UJ71 328 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 M0R036 132 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ORC5O43913 435 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SEMA4FO95754 770 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 GSTM3P21266 225 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SOX2P48431 317 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 PPP1R8Q12972 351 aaKnown RBP10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SLAMF1Q13291 335 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 MPP2Q14168 576 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 PGM2L1Q6PCE3 622 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 CASTOR1Q8WTX7 329 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ATOH1Q92858 354 aaPredicted RBP10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SCAMP4Q969E2 229 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 KCTD7Q96MP8 289 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ERMAPQ96PL5 475 aaPredicted RBP10.63□□□□□ -0.71
TRIM41-209ENST00000515834 MAF1Q9H063 256 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 PCDHAC1Q9H158 963 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 NSUN3Q9H649 340 aaKnown RBP10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SALL3Q9BXA9 1300 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 FZD9O00144 591 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ACTL6BO94805 426 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 CA3P07451 260 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SLC9A3P48764 834 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 NIPAL1Q6NVV3 410 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 USP43Q70EL4 1123 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 RASGEF1CQ8N431 466 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 BORCS5Q969J3 196 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ARHGAP39Q9C0H5 1083 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 AASSQ9UDR5 926 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 M0QX08 132 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 CCRL2O00421 344 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 LATO43561 262 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 TLX2O43763 284 aaPredicted RBP10.63□□□□□ -0.71
TRIM41-209ENST00000515834 RBM34P42696 430 aaKnown RBP10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SLC15A1P46059 708 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 NUDT6P53370 316 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 RUNX3Q13761 415 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 EGFLAMQ63HQ2 1017 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 SYCE2Q6PIF2 218 aa10.63□□□□□ -0.71
TRIM41-209ENST00000515834 ASB12Q8WXK4 309 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms