RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 BEX2Q9BXY8 128 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR62Q9BZJ7 368 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 POMKQ9H5K3 350 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PDFQ9HBH1 243 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 INTS10Q9NVR2 710 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 NDUFAF4Q9P032 175 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 SLCO3A1Q9UIG8 710 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR34Q9UPC5 381 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 HSPB11Q9Y547 144 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 COL4A6Q14031 1691 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF106Q9H2Y7 1883 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 A8MT66 165 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 SDHDO14521 159 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 TBC1D4O60343 1298 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 EFCAB14O75071 495 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 DIRAS3O95661 229 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PAMP19021 973 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PPP5CP53041 499 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 CDKN2DP55273 166 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MRPS22P82650 360 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ACVR1Q04771 509 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 POLD3Q15054 466 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 TRIP4Q15650 581 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 TAB1Q15750 504 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ETFDHQ16134 617 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 HFEQ30201 348 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MARC1Q5VT66 337 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 RPS27LQ71UM5 84 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 RRM2BQ7LG56 351 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 LDB1Q86U70 411 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 WDSUB1Q8N9V3 476 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 OR2L5Q8NG80 312 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 SFT2D1Q8WV19 159 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MEGF10Q96KG7 1140 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 BTN2A3PQ96KV6 586 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 GLT1D1Q96MS3 346 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 SPATA9Q9BWV2 254 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 GPN2Q9H9Y4 310 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ZBTB26Q9HCK0 441 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MARCH4Q9P2E8 410 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 KCTD3Q9Y597 815 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PCDHB5Q9Y5E4 795 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MICAL3Q7RTP6 2002 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 OR51F1A6NGY5 319 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ABCD4O14678 606 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 S100A8P05109 93 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 FBXO45P0C2W1 286 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ACVRL1P37023 503 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 EIF2DP41214 584 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 KCNC1P48547 511 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 DEFA1P59665 94 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 DEFA3P59666 94 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 CSHL1Q14406 222 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 GANABQ14697 944 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MEDAGQ5VYS4 303 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 STEAP3Q658P3 488 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC25A25Q6KCM7 469 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 CYHR1Q6ZMK1 362 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 USP53Q70EK8 1073 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 GPALPP1Q8IXQ4 340 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 BHLHE22Q8NFJ8 381 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 OR10J5Q8NHC4 309 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PABPC5Q96DU9 382 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MFSD1Q9H3U5 465 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 KLHL1Q9NR64 748 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 SARDHQ9UL12 918 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 B4E171 279 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 H7C1Q1 480 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 UGDHO60701 494 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 VPS4BO75351 444 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TGM6O95932 706 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 S1PR4O95977 384 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MT-CO1P00395 513 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ACADMP11310 421 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 FOSL2P15408 326 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 FGFR3P22607 806 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ATP5F1P24539 256 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ALDH4A1P30038 563 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CLCN5P51795 746 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MAZP56270 477 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 C1QTNF8P60827 252 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 LMAN2Q12907 356 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TAF10Q12962 218 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 HABP2Q14520 560 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF181Q2M3W8 571 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TCTN1Q2MV58 587 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 RPS26P11Q5JNZ5 115 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 HECTD2Q5U5R9 776 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF549Q6P9A3 640 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 MCATQ8IVS2 390 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TRMT10AQ8TBZ6 339 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 AP2M1Q96CW1 435 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CCNL2Q96S94 520 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 REXO4Q9GZR2 422 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 DDX31Q9H8H2 851 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 C19orf12Q9NSK7 152 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 EXD2Q9NVH0 621 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC23A1Q9UHI7 598 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 CDYLQ9Y232 598 aa7.19□□□□□ -1.26
PDLIM5-219ENST00000514743 TP53BP1Q12888 1972 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms