RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 C16orf47Q6ZP98 133 aaPredicted RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 SEM1Q6ZVN7 128 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 SDCCAG8Q86SQ7 713 aaPredicted RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 C17orf64Q86WR6 236 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 CXorf67Q86X51 503 aaPredicted RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 SLC13A5Q86YT5 568 aaPredicted RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 CNGA4Q8IV77 575 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 VSTM4Q8IW00 320 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 CIARTQ8N365 385 aaPredicted RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 PRELID2Q8N945 189 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 SIMC1Q8NDZ2 872 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 ARMC2Q8NEN0 867 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 SARAFQ96BY9 339 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 LRRC46Q96FV0 321 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 FAM173AQ9BQD7 235 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 AARSD1Q9BTE6 412 aaKnown RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 CLK4Q9HAZ1 481 aaKnown RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 RAB6BQ9NRW1 208 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 KLHL42Q9P2K6 505 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 FOXD3Q9UJU5 478 aaPredicted RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 ADAM21Q9UKJ8 722 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 DRG1Q9Y295 367 aaKnown RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 PCDHA13Q9Y5I0 950 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 TCRBV7S2A1N4TA0A589 114 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 TUBAL3A6NHL2 446 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 GOLGA8KD6RF30 607 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 GOLGA8TH3BQL2 631 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 H7C1Q1 480 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ARHGEF9O43307 516 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 PRKNO60260 465 aaPredicted RBP10.14□□□□□ -0.79
DDX41-216ENST00000513562 HCN1O60741 890 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ZFAND5O76080 213 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 CDH1P12830 882 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ENO3P13929 434 aaPredicted RBP10.14□□□□□ -0.79
DDX41-216ENST00000513562 OGNP20774 298 aaKnown RBP10.14□□□□□ -0.79
DDX41-216ENST00000513562 BMP5P22003 454 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 FOXO1Q12778 655 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 CUL1Q13616 776 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 OASLQ15646 514 aaKnown RBP10.14□□□□□ -0.79
DDX41-216ENST00000513562 XKR6Q5GH73 641 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 Q5PR19 223 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 IL20RBQ6UXL0 311 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 CYHR1Q6ZMK1 362 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ABHD13Q7L211 337 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 STRA8Q7Z7C7 330 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 NAXEQ8NCW5 288 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ASB15Q8WXK1 588 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ATG4AQ8WYN0 398 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 NCLNQ969V3 563 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 MFSD3Q96ES6 412 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 CCDC77Q9BR77 488 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 IL22Q9GZX6 179 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ZFATQ9P243 1243 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 SPRR3Q9UBC9 169 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 MTRF1LQ9UGC7 380 aaKnown RBP10.14□□□□□ -0.79
DDX41-216ENST00000513562 MED16Q9Y2X0 877 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 PCDHGB3Q9Y5G1 929 aa10.14□□□□□ -0.79
DDX41-216ENST00000513562 ATRQ13535 2644 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 PHF3Q92576 2039 aaKnown RBP10.13□□□□□ -0.79
DDX41-216ENST00000513562 ATP6AP2A0A1C7CYW4 349 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SYCE3A1L190 88 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 CLCA1A8K7I4 914 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 INAFM1C9JVW0 142 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 PSMD12O00232 456 aaPredicted RBP10.13□□□□□ -0.79
DDX41-216ENST00000513562 CBFA2T2O43439 604 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 ATP6AP2O75787 350 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 IFNB1P01574 187 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 ZNF888P0CJ79 500 aaPredicted RBP10.13□□□□□ -0.79
DDX41-216ENST00000513562 RNH1P13489 461 aaKnown RBP10.13□□□□□ -0.79
DDX41-216ENST00000513562 CNR1P21554 472 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SOX3P41225 446 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 PPP2R2BQ00005 443 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SORDQ00796 357 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 RGS1Q08116 209 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SLC10A1Q14973 349 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 POMZP3Q6PJE2 187 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 LCTLQ6UWM7 567 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 UBE2R2Q712K3 238 aaPredicted RBP10.13□□□□□ -0.79
DDX41-216ENST00000513562 CENPUQ71F23 418 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 CILP2Q8IUL8 1156 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SCUBE1Q8IWY4 988 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 ULK2Q8IYT8 1036 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 LRRC75A-AS1Q8N1F1 130 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 FBXW8Q8N3Y1 598 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 LRRC57Q8N9N7 239 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 GOLM1Q8NBJ4 401 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 ABHD11Q8NFV4 315 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 OR4K1Q8NGD4 311 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 NT5CQ8TCD5 201 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 UTP15Q8TED0 518 aaKnown RBP10.13□□□□□ -0.79
DDX41-216ENST00000513562 KCNJ9Q92806 393 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 PDLIM2Q96JY6 352 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SCYL1Q96KG9 808 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 RASL10BQ96S79 203 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 KIFC1Q9BW19 673 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SGPP1Q9BX95 441 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 LDAHQ9H6V9 325 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 LIN28AQ9H9Z2 209 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms