RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PREBQ9HCU5 417 aa12.04□□□□□ -0.48
COL11A1-210ENST00000512756 HSPE1-MOB4S4R3N1 261 aa12.04□□□□□ -0.48
COL11A1-210ENST00000512756 TSPAN4O14817 238 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 PCDHGA12O60330 932 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 HTR1AP08908 422 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 HOXD8P13378 290 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 IVDP26440 423 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 HLCSP50747 726 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 RPS3AP61247 264 aaKnown RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 FPGSQ05932 587 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 GALNT1Q10472 559 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 CBFBQ13951 182 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 GINS1Q14691 196 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 CMPK2Q5EBM0 449 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 THAP6Q8TBB0 222 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 SETD6Q8TBK2 473 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 RTP4Q96DX8 246 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 WNT6Q9Y6F9 365 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 COL14A1Q05707 1796 aaKnown RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 SNNO75324 88 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 GSRP00390 522 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 CHRNA1P02708 482 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 BCKDHAP12694 445 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 RPL10P27635 214 aaKnown RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ELK4P28324 431 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 TIA1P31483 386 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 MAGEA2P43356 314 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 PREPP48147 710 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 PTGR1Q14914 329 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 TRAM1L1Q8N609 369 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 SPERTQ8NA61 448 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 CPNE2Q96FN4 548 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 PIP5K1AQ99755 562 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ENAMQ9NRM1 1142 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ZNF451Q9Y4E5 1061 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ALG5Q9Y673 324 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 GBAP04062 536 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 PIM1P11309 404 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 FUT4P22083 530 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 FDXRP22570 491 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ACRV1P26436 265 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 IST1P53990 364 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 OGFRL1Q5TC84 451 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ALG1LQ6GMV1 187 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 XKRXQ6PP77 449 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 C7orf61Q8IZ16 206 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ZNF366Q8N895 744 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 TMIEQ8NEW7 156 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 TSTD1Q8NFU3 115 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 OR4E2Q8NGC2 313 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 WACQ9BTA9 647 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 TAS2R10Q9NYW0 307 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 NPIPA5E9PKD4 350 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 INPPL1O15357 1258 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 FLRT2O43155 660 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ZNF623O75123 536 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 GNSP15586 552 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 CD47Q08722 323 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 PCBP2Q15366 365 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 ZNF101Q8IZC7 436 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 NSUN5Q96P11 429 aaKnown RBP12.03□□□□□ -0.48
COL11A1-210ENST00000512756 MLXQ9UH92 298 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 NPIPA1Q9UND3 350 aa12.03□□□□□ -0.48
COL11A1-210ENST00000512756 COCHO43405 550 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 JUPP14923 745 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 SHMT2P34897 504 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 HNF1BP35680 557 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 GABARAPL2P60520 117 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 LAPTM4AQ15012 233 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 SLC27A4Q6P1M0 643 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 CARM1Q86X55 608 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 GALNT12Q8IXK2 581 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 SHKBP1Q8TBC3 707 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 BIRC8Q96P09 236 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 FIZ1Q96SL8 496 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 GNG8Q9UK08 70 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 LIPT1Q9Y234 373 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 LTBP3Q9NS15 1303 aa12.02□□□□□ -0.48
COL11A1-210ENST00000512756 B4DGG1 531 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 PDYNP01213 254 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 HSD17B1P14061 328 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 LY6G5CQ5SRR4 150 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 ANKRD26P1Q6NSI1 321 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 RPL13AP3Q6NVV1 102 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 SUSD1Q6UWL2 747 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 TRIM74Q86UV6 250 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 TRIM73Q86UV7 250 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 JAGN1Q8N5M9 183 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL11A1-210ENST00000512756 ZNF431Q8TF32 576 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-210ENST00000512756 GMLQ99445 158 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 PHOX2BQ99453 314 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 KCNK6Q9Y257 313 aa12.02□□□□□ -0.49
COL11A1-210ENST00000512756 AHSA1O95433 338 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms