RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 MOCS1Q9NZB8 636 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 CTNNAL1Q9UBT7 734 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 MMACHCQ9Y4U1 282 aa13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 NCOA6Q14686 2063 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-229ENST00000512418 E7ESA3 106 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 CCDC188H7C350 402 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 TP73O15350 636 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 C1GALT1C1LP0DN25 315 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 ABOP16442 354 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 SLC6A12P48065 614 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 HLCSP50747 726 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 BTN3A2P78410 334 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 TERF2Q15554 542 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 TMIGD1Q6UXZ0 262 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 SLCO4C1Q6ZQN7 724 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 GDF7Q7Z4P5 450 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 CEP97Q8IW35 865 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 APCDD1LQ8NCL9 501 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 B3GNT7Q8NFL0 401 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 RHBDF1Q96CC6 855 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 SEC16BQ96JE7 1060 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 FAR2Q96K12 515 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 DEFB126Q9BYW3 111 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 TRIM31Q9BZY9 425 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 AICDAQ9GZX7 198 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 MEMO1Q9Y316 297 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 FBN2P35556 2912 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 PCNX1Q96RV3 2341 aa13.75□□□□□ -0.21
CCHCR1-229ENST00000512418 CSMD2Q7Z408 3487 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 A0A088AWK7 358 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 H2AFYO75367 372 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 MYO1DO94832 1006 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 COX6B1P14854 86 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF10P21506 573 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 HPDP32754 393 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 GDF5P43026 501 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 CLCN2P51788 898 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 SLC12A2P55011 1212 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 SLBPQ14493 270 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 TGFBIQ15582 683 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 ZNF227Q86WZ6 799 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 SCUBE1Q8IWY4 988 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 KRT78Q8N1N4 520 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 POGLUT1Q8NBL1 392 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 ADAMTS18Q8TE60 1221 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 MS4A6EQ96DS6 147 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 PDLIM2Q96JY6 352 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 MCMBPQ9BTE3 642 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 NPLQ9BXD5 320 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 CAPS2Q9BXY5 557 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 PITHD1Q9GZP4 211 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 GPRC5BQ9NZH0 403 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 KLF13Q9Y2Y9 288 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 SAR1BQ9Y6B6 198 aa13.74□□□□□ -0.21
CCHCR1-229ENST00000512418 PKDREJQ9NTG1 2253 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 TRBV11-1A0A0K0K1C0 115 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 LRIT2A6NDA9 550 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 NCF1BA6NI72 391 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 A8MUA0 341 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 NCF1CA8MVU1 366 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 CLDN4O14493 209 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 ERI3O43414 337 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 CLEC3AO75596 197 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 NCF1P14598 390 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 ELAVL4P26378 380 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 HNRNPH1P31943 449 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 PAFAH1B1P43034 410 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 HSD17B7P56937 341 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 GNG11P61952 73 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 POU4F1Q01851 419 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 CBLBQ13191 982 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 C18orf21Q32NC0 220 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 RNFT1Q5M7Z0 435 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 ZBED8Q8IZ13 594 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 EID3Q8N140 333 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 TCAIMQ8N3R3 496 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 CCT6BQ92526 530 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 VMP1Q96GC9 406 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 NAPGQ99747 312 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 DERL2Q9GZP9 239 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 EHD1Q9H4M9 534 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 NT5DC2Q9H857 520 aa13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 CNOT10Q9H9A5 744 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 PPIEQ9UNP9 301 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 MRPS33Q9Y291 106 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-229ENST00000512418 A0A0G2JN53 185 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 SYNDIG1LA6NDD5 238 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 ANKDD1BA6NHY2 528 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 USP27XA6NNY8 438 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 KLRC4-KLRK1H3BQV0 150 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 PRRG2O14669 202 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 B3GALT2O43825 422 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 ITGA10O75578 1167 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 WISP3O95389 354 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 CLDN14O95500 239 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 TFEBP19484 476 aa13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 RPL21P46778 160 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-229ENST00000512418 MEOX1P50221 254 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms