RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CUBNO60494 3623 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 TCRBV16S1A1N1A0A5B0 115 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 H3BMM5 538 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 SLC16A5O15375 505 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 CHST10O43529 356 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 HCN1O60741 890 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 B4GALT2O60909 372 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 SLC35G6P0C7Q6 338 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 BMP5P22003 454 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 EIF3BP55884 814 aaKnown RBP10.74□□□□□ -0.69
RNF4-216ENST00000511859 BTG2P78543 158 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 TERF2Q15554 542 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 HYAL4Q2M3T9 481 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 CAPN13Q6MZZ7 669 aaPredicted RBP10.74□□□□□ -0.69
RNF4-216ENST00000511859 MAATS1Q7Z4T9 603 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 AFAP1L2Q8N4X5 818 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 TMEM251Q8N6I4 163 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 OR5T3Q8NGG3 340 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 PIGTQ969N2 578 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 BIRC8Q96P09 236 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 FAM173AQ9BQD7 235 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 CCDC77Q9BR77 488 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 YIPF4Q9BSR8 244 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 PCBD2Q9H0N5 130 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 CLK4Q9HAZ1 481 aaKnown RBP10.74□□□□□ -0.69
RNF4-216ENST00000511859 PACSIN2Q9UNF0 486 aaPredicted RBP10.74□□□□□ -0.69
RNF4-216ENST00000511859 PPIEQ9UNP9 301 aaKnown RBP10.74□□□□□ -0.69
RNF4-216ENST00000511859 DRG1Q9Y295 367 aaKnown RBP10.74□□□□□ -0.69
RNF4-216ENST00000511859 LIPGQ9Y5X9 500 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 DSCAMO60469 2012 aa10.74□□□□□ -0.69
RNF4-216ENST00000511859 ANK3Q12955 4377 aaKnown RBP10.73□□□□□ -0.69
RNF4-216ENST00000511859 ZNF860A6NHJ4 632 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 RNF212BA8MTL3 300 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 SMAD7O15105 426 aaKnown RBP10.73□□□□□ -0.69
RNF4-216ENST00000511859 PFDN6O15212 129 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 GALR3O60755 368 aaPredicted RBP10.73□□□□□ -0.69
RNF4-216ENST00000511859 SMPD2O60906 423 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 CRLF1O75462 422 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 ZFAND5O76080 213 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 CHRM3P20309 590 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 GRK3P35626 688 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 MAGEA5P43359 124 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 SORDQ00796 357 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 RPS6KA1Q15418 735 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 CTSL3PQ5NE16 218 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 C11orf63Q6NUN7 778 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 IL20RBQ6UXL0 311 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 PPP1R21Q6ZMI0 780 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 C16orf47Q6ZP98 133 aaPredicted RBP10.73□□□□□ -0.69
RNF4-216ENST00000511859 LRRC57Q8N9N7 239 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 LINC01560Q8TB33 94 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 ASB15Q8WXK1 588 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 VMP1Q96GC9 406 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 Q96MF0 132 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 CNPPD1Q9BV87 410 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 TRPS1Q9UHF7 1281 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 TSR3Q9UJK0 312 aaKnown RBP10.73□□□□□ -0.69
RNF4-216ENST00000511859 TCAF1Q9Y4C2 921 aa10.73□□□□□ -0.69
RNF4-216ENST00000511859 IGKV3D-11A0A0A0MRZ8 115 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 TRGV5A0A0B4J1U4 118 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 ATP6AP2A0A1C7CYW4 349 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 A8MUA0 341 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 ZBTB14O43829 449 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 LCMT2O60294 686 aaKnown RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 ATP6AP2O75787 350 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 SYF2O95926 243 aaKnown RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 ESR1P03372 595 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 HRGP04196 525 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 ALOX12P18054 663 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 BMP7P18075 431 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 MAOAP21397 527 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 FMO4P31512 558 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 CEACAM8P31997 349 aaPredicted RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 CTNNA1P35221 906 aaKnown RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 TIMP3P35625 211 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 ADARP55265 1226 aaKnown RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 ACSBG2Q5FVE4 666 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 PEX26Q7Z412 305 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 SDCCAG8Q86SQ7 713 aaPredicted RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 FBXW8Q8N3Y1 598 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 RNF10Q8N5U6 811 aaKnown RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 PPHLN1Q8NEY8 458 aaKnown RBP10.72□□□□□ -0.69
RNF4-216ENST00000511859 EXO5Q9H790 373 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 CHRAC1Q9NRG0 131 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 SAMD15Q9P1V8 674 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 ABCA1O95477 2261 aa10.72□□□□□ -0.69
RNF4-216ENST00000511859 GOLGA6L9A6NEM1 432 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 AHRRA9YTQ3 701 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 GFYI3L273 518 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 DNAJB6O75190 326 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 NIPSNAP2O75323 286 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 OR2J2O76002 312 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 MYO1DO94832 1006 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 EPPINO95925 133 aa10.71□□□□□ -0.69
RNF4-216ENST00000511859 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.69
RNF4-216ENST00000511859 COILP38432 576 aaPredicted RBP10.71□□□□□ -0.69
RNF4-216ENST00000511859 SKIV2L2P42285 1042 aaKnown RBP10.71□□□□□ -0.69
RNF4-216ENST00000511859 GPR143P51810 404 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms