RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ARCN1P48444 511 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 MEOX2P50222 304 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SUCLG1P53597 346 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 COPZ1P61923 177 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ABATP80404 500 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 GCNT1Q02742 428 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 GLO1Q04760 184 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ABRQ12979 859 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PMS2P3Q13401 168 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 DDX39BQ13838 428 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CAMK1Q14012 370 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SMCO1Q147U7 214 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 MTF1Q14872 753 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 VEPH1Q14D04 833 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 EMC2Q15006 297 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PON2Q15165 354 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 EIF2S3LQ2VIR3 472 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF260Q3ZCT1 412 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 GXYLT1Q4G148 440 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 FSCBQ5H9T9 825 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TMEM31Q5JXX7 168 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TCEAL6Q6IPX3 200 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAB12Q6IQ22 244 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF544Q6NX49 715 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 C5orf46Q6UWT4 87 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAD9BQ6WBX8 426 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PLEKHG7Q6ZR37 379 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 DHDDSQ86SQ9 333 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 KBTBD6Q86V97 674 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 LACC1Q8IV20 430 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 NUDCD3Q8IVD9 361 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM217AQ8IXS0 508 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 THNSL1Q8IYQ7 743 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CYP4Z2PQ8N1L4 340 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SRBD1Q8N5C6 995 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PCDH20Q8N6Y1 951 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF366Q8N895 744 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 C12orf29Q8N999 325 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 Q8N9P0 234 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 C9orf106Q8NAJ2 232 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 NAXEQ8NCW5 288 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 RBM15BQ8NDT2 890 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 MCPH1Q8NEM0 835 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ENGASEQ8NFI3 743 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PNPT1Q8TCS8 783 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 HDAC2Q92769 488 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC25A28Q96A46 364 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZUFSPQ96AP4 578 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TESCQ96BS2 214 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UBXN10Q96LJ8 280 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CAMK1GQ96NX5 476 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SERPINB11Q96P15 392 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SEC22CQ9BRL7 303 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PELOQ9BRX2 385 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 BTBD10Q9BSF8 475 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 LRRC1Q9BTT6 524 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRAF4Q9BUZ4 470 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TMEM109Q9BVC6 243 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CHID1Q9BWS9 393 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC26A6Q9BXS9 759 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CADM1Q9BY67 442 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 C11orf49Q9H6J7 331 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 LRRC40Q9H9A6 602 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 COG4Q9H9E3 785 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 LIN28AQ9H9Z2 209 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 C17orf75Q9HAS0 396 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A7Q9HAW7 530 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A10Q9HAW8 530 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT1A8Q9HAW9 530 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 G6PC2Q9NQR9 355 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARL15Q9NXU5 204 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 TMOD2Q9NZR1 351 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CNOT7Q9UIV1 285 aaKnown RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ACSL5Q9ULC5 683 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 ACOT9Q9Y305 439 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 PKP3Q9Y446 797 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 RIPK3Q9Y572 518 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 SIPA1L3O60292 1781 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 MYH11P35749 1972 aa4.47□□□□□ -1.69
HMGB3P13-201ENST00000511263 CICQ96RK0 1608 aaPredicted RBP4.46□□□□□ -1.69
HMGB3P13-201ENST00000511263 RFX7Q2KHR2 1363 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 A0A1W2PPW3 197 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMEM120BA0PK00 339 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM92AA1XBS5 289 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PRR23AA6NEV1 266 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 E9PAM4 449 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 H0YGN5 161 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 K7ERQ8 282 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GYG2O15488 501 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SYNCRIPO60506 623 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 IDH1O75874 414 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SOX30O94993 753 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 NDUFB8O95169 186 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GCNT3O95395 438 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CCNE2O96020 404 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ATP1A1P05023 1023 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CYP21A2P08686 494 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CD48P09326 243 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CYP4B1P13584 511 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms