RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DKK3Q9UBP4 350 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 NPIPB15A6NHN6 443 aaPredicted RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 ADAM12O43184 909 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 JRKO75564 520 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 HTR1AP08908 422 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 TLE2Q04725 743 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 HEPACAMQ14CZ8 416 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 CRB2Q5IJ48 1285 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 IQCF1Q8N6M8 205 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 DYNC2LI1Q8TCX1 351 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 TRIB2Q92519 343 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 TBX5Q99593 518 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 UCK2Q9BZX2 261 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 CCDC177Q9NQR7 707 aaPredicted RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 HSPB11Q9Y547 144 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 SSC5DA1L4H1 1573 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 A0A1W2PQ72 361 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 ACPPP15309 386 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 LEXMQ3ZCV2 418 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 KIAA1161Q6NSJ0 714 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 MEX3DQ86XN8 651 aaKnown RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 OR5M11Q96RB7 305 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 PPT2Q9UMR5 302 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 RPL36Q9Y3U8 105 aaKnown RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 UGT2A1Q9Y4X1 527 aa14.32□□□□□ -0.12
USP38-202ENST00000510377 CFAP20Q9Y6A4 193 aaKnown RBP14.32□□□□□ -0.12
USP38-202ENST00000510377 FAM227AF5H4B4 570 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 MPZL2O60487 215 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 YES1P07947 543 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 SLC2A2P11168 524 aaPredicted RBP14.31□□□□□ -0.12
USP38-202ENST00000510377 AP1S2P56377 157 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 TIAL1Q01085 375 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP38-202ENST00000510377 SELENBP1Q13228 472 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 SPHARQ15513 63 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 CCDC149Q6ZUS6 474 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 LIMS2Q7Z4I7 341 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 GPR151Q8TDV0 419 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 SLC38A2Q96QD8 506 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 P2RY13Q9BPV8 354 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 TMED9Q9BVK6 235 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 GFRA2O00451 464 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 CDK1P06493 297 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 ALPPL2P10696 532 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 SYN1P17600 705 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 AMD1P17707 334 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 MYL9P24844 172 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 TAS2R41P59536 307 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 NKX3-2P78367 333 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 RGNQ15493 299 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 WSCD2Q2TBF2 565 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 SNAP47Q5SQN1 464 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 SHFQ7M4L6 423 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 MMAAQ8IVH4 418 aaKnown RBP14.31□□□□□ -0.12
USP38-202ENST00000510377 DCAF4L2Q8NA75 395 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 FRMD6Q96NE9 622 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 WACQ9BTA9 647 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 PCDHGA3Q9Y5H0 932 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 NINQ8N4C6 2090 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 ARID2Q68CP9 1835 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 PCDH17O14917 1159 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 IGFBP4P22692 258 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 GGT2P36268 569 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 RPL3P39023 403 aaKnown RBP14.31□□□□□ -0.12
USP38-202ENST00000510377 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 MPPE1Q53F39 396 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 CHST9Q7L1S5 443 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 TAS1R1Q7RTX1 841 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 KRT78Q8N1N4 520 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 HUS1BQ8NHY5 278 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 MYLIPQ8WY64 445 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 MAGEB10Q96LZ2 347 aaPredicted RBP14.31□□□□□ -0.12
USP38-202ENST00000510377 NTMT1Q9BV86 223 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 TSSK6Q9BXA6 273 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 TMEM121BQ9BXQ6 578 aaPredicted RBP14.31□□□□□ -0.12
USP38-202ENST00000510377 KLHL28Q9NXS3 571 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 TMEFF2Q9UIK5 374 aaPredicted RBP14.31□□□□□ -0.12
USP38-202ENST00000510377 SLC45A1Q9Y2W3 748 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 MED16Q9Y2X0 877 aa14.31□□□□□ -0.12
USP38-202ENST00000510377 WWP2O00308 870 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 RTCAO00442 366 aaKnown RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 SCAMP1O15126 338 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 TSPAN6O43657 245 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 KCNK5O95279 499 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 PRR35P0CG20 571 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ADORA3P0DMS8 318 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 JUPP14923 745 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ZNF24P17028 368 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 TNFSF8P32971 234 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 SDC2P34741 201 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CXCR4P61073 352 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 ATAT1Q5SQI0 421 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 FAM46DQ8NEK8 389 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 CIDECQ96AQ7 238 aaPredicted RBP14.3□□□□□ -0.12
USP38-202ENST00000510377 VMP1Q96GC9 406 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 FCRL4Q96PJ5 515 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 BCL7BQ9BQE9 202 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 C5AR2Q9P296 337 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 PLAGL1Q9UM63 463 aa14.3□□□□□ -0.12
USP38-202ENST00000510377 IGLV3-10A0A075B6K4 115 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms