RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GMPRP36959 345 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 TSFMP43897 325 aaKnown RBP18.72■□□□□ 0.59
SFXN1-209ENST00000508290 ARFIP1P53367 373 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 BTN3A2P78410 334 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 TLR1Q15399 786 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 FBXO48Q5FWF7 155 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 CHSY3Q70JA7 882 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 TEX9Q8N6V9 391 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 MAGEB10Q96LZ2 347 aaPredicted RBP18.72■□□□□ 0.59
SFXN1-209ENST00000508290 TXLNGYQ9BZA5 131 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 SLC29A3Q9BZD2 475 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 RNF32Q9H0A6 362 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 MRPL46Q9H2W6 279 aaKnown RBP18.72■□□□□ 0.59
SFXN1-209ENST00000508290 KLHL31Q9H511 634 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 PRDM9Q9NQV7 894 aa18.72■□□□□ 0.59
SFXN1-209ENST00000508290 DYTNA2CJ06 578 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 BLACEA4D250 179 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 CLDN4O14493 209 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 PRAMEF4O60810 478 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 MYBL2P10244 700 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 CD22P20273 847 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 SOX11P35716 441 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 PIK3CBP42338 1070 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 MTTPP55157 894 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 PRAMEF9Q5VWM5 478 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 ABHD17CQ6PCB6 329 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 CA13Q8N1Q1 262 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 Q8NA96 180 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 GALNT11Q8NCW6 608 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 M1APQ8TC57 530 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 CMTM7Q96FZ5 175 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 TBCDQ9BTW9 1192 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 ACTR8Q9H981 624 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 CPSF2Q9P2I0 782 aaKnown RBP18.71■□□□□ 0.59
SFXN1-209ENST00000508290 PSMC3IPQ9P2W1 217 aaPredicted RBP18.71■□□□□ 0.59
SFXN1-209ENST00000508290 ASB1Q9Y576 335 aa18.71■□□□□ 0.59
SFXN1-209ENST00000508290 MASP2O00187 686 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 VPS4BO75351 444 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 SEC24DO94855 1032 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-209ENST00000508290 UBR5O95071 2799 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-209ENST00000508290 EFNA3P52797 238 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 MLLT10P55197 1068 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 HSD17B7P56937 341 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 OR4D2P58180 307 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 ACTN3Q08043 901 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-209ENST00000508290 GTF2H2Q13888 395 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 SLC29A2Q14542 456 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 TERF2Q15554 542 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 INPP5JQ15735 1006 aaPredicted RBP18.7■□□□□ 0.58
SFXN1-209ENST00000508290 BTBD16Q32M84 506 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 GTF2H2CQ6P1K8 395 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 LANCL3Q6ZV70 420 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 VN1R5Q7Z5H4 357 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 ZNF595Q8IYB9 648 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 OR7G3Q8NG95 312 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 UHMK1Q8TAS1 419 aaKnown RBP18.7■□□□□ 0.58
SFXN1-209ENST00000508290 BRIX1Q8TDN6 353 aaKnown RBP18.7■□□□□ 0.58
SFXN1-209ENST00000508290 ACMSDQ8TDX5 336 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 ZNF473Q8WTR7 871 aaKnown RBP18.7■□□□□ 0.58
SFXN1-209ENST00000508290 PSMF1Q92530 271 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 SCYL1Q96KG9 808 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 QRFPRQ96P65 431 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 MESP1Q9BRJ9 268 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 MS4A8Q9BY19 250 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 MFRPQ9BY79 579 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 MMP25Q9NPA2 562 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 PSD3Q9NYI0 1048 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 CCDC88CQ9P219 2028 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 XPR1Q9UBH6 696 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 VPS4AQ9UN37 437 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 SPACA6W5XKT8 324 aa18.7■□□□□ 0.58
SFXN1-209ENST00000508290 H0YIV9 168 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 E2F3O00716 465 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 CDC123O75794 336 aaPredicted RBP18.69■□□□□ 0.58
SFXN1-209ENST00000508290 PLA2G16P53816 162 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 RAB38P57729 211 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 OLR1P78380 273 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 SFT2D3Q587I9 215 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 TEX35Q5T0J7 233 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 ABHD17BQ5VST6 288 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 PAPD4Q6PIY7 484 aaKnown RBP18.69■□□□□ 0.58
SFXN1-209ENST00000508290 LGI4Q8N135 537 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 PLD6Q8N2A8 252 aaKnown RBP18.69■□□□□ 0.58
SFXN1-209ENST00000508290 PTGR2Q8N8N7 351 aaPredicted RBP18.69■□□□□ 0.58
SFXN1-209ENST00000508290 DNAJB14Q8TBM8 379 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 HAS2Q92819 552 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 PTCHD1Q96NR3 888 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 RBCK1Q9BYM8 510 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 AICDAQ9GZX7 198 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 IPPKQ9H8X2 491 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 LYRM4Q9HD34 91 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 PRM3Q9NNZ6 103 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 ABI3Q9P2A4 366 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 PTGFRNQ9P2B2 879 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 MYO18BQ8IUG5 2567 aa18.69■□□□□ 0.58
SFXN1-209ENST00000508290 IGKV3D-11A0A0A0MRZ8 115 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 TCRBV16S1A1N1A0A5B0 115 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 B4GALT2O60909 372 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 SCELO95171 688 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 TBX6O95947 436 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms