RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 C3orf18Q9UK00 162 aa7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 UBE2J1Q9Y385 318 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-206ENST00000508170 ABCC11Q96J66 1382 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 METTL21EPA6NDL7 271 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 GOLGA6L9A6NEM1 432 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 MARCH11A6NNE9 402 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 ERI2A8K979 691 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 NPIPB5A8MRT5 1133 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 SLC22A2O15244 555 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 RNF8O76064 485 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 ASS1P00966 412 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 GNAO1P09471 354 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 OR2T7P0C7T2 308 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 FUT4P22083 530 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 UBA1P22314 1058 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 HNRNPH1P31943 449 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PRDX2P32119 198 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PPT1P50897 306 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 TPMTP51580 245 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 NDST2P52849 883 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 HNRNPH2P55795 449 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 RPL10AP62906 217 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 MRPS25P82663 173 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 ILF2Q12905 390 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 TSPAN31Q12999 210 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 ETFDHQ16134 617 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 GOLGA7BQ2TAP0 167 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PTCHD3Q3KNS1 767 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 HP1BP3Q5SSJ5 553 aaPredicted RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PRAMEF19Q5SWL8 479 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PRSS57Q6UWY2 283 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 TMEM126BQ8IUX1 230 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 C1orf87Q8N0U7 546 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 OR5D18Q8NGL1 313 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PHOSPHO1Q8TCT1 267 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 OTUB1Q96FW1 271 aaPredicted RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PPP1R16AQ96I34 528 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 RANBP9Q96S59 729 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 H2AFJQ9BTM1 129 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 PAPOLGQ9BWT3 736 aaKnown RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 NPLQ9BXD5 320 aaPredicted RBP7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 ELOVL6Q9H5J4 265 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 RAB9BQ9NP90 201 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 ADA2Q9NZK5 511 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 ENOPH1Q9UHY7 261 aa7.15□□□□□ -1.26
PDGFRA-206ENST00000508170 TMEM89A2RUT3 159 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 FABP12A6NFH5 140 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 MGAT4DA6NG13 374 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 VAMP5O95183 116 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 PROS1P07225 676 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 CRYGBP07316 175 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 ANKRD34CP0C6C1 535 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 TRIM49P0CI25 452 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 TRIM49CP0CI26 452 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 CXCR5P32302 372 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 FOXL2P58012 376 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 RAB4BP61018 213 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 MTAPQ13126 283 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 IL13RA2Q14627 380 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 RNPS1Q15287 305 aaKnown RBP7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 TMEM44Q2T9K0 475 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 GJB7Q6PEY0 223 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 OR5T3Q8NGG3 340 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 PLEKHO2Q8TD55 490 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 SOCS4Q8WXH5 440 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 WNT2BQ93097 391 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 MARS2Q96GW9 593 aaKnown RBP7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 BBS4Q96RK4 519 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 MYOCQ99972 504 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 OR2B2Q9GZK3 357 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 POLR3FQ9H1D9 316 aaPredicted RBP7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 CNGB3Q9NQW8 809 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 DIABLOQ9NR28 239 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 BABAM1Q9NWV8 329 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC2A8Q9NY64 477 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 POLKQ9UBT6 870 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 CA5BQ9Y2D0 317 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 WASF2Q9Y6W5 498 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 V9GYQ6 96 aa7.15□□□□□ -1.27
PDGFRA-206ENST00000508170 PREX1Q8TCU6 1659 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 GRIN2DO15399 1336 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 WDR33Q9C0J8 1336 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 LRRN3E7EW58 273 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC28A1O00337 649 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 NDUFA2O43678 99 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 RSL1D1O76021 490 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 CBX6O95503 412 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 FGF5P12034 268 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 DRD1P21728 446 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 DRD4P21917 467 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 PTGS1P23219 599 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 ACADLP28330 430 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 CYP2C18P33260 490 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 ACADVLP49748 655 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 AP3S2P59780 193 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 SPCS3P61009 180 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 NR1I3Q14994 352 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 ZCWPW2Q504Y3 356 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 SEL1L2Q5TEA6 688 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms