RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ZNF793Q6ZN11 406 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 RBM44Q6ZP01 1051 aaKnown RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 PIP4P1Q86T03 277 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 SLITRK4Q8IW52 837 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 GPR135Q8IZ08 494 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 TMEM132CQ8N3T6 1108 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 KRTCAP2Q8N6L1 136 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 ACOT4Q8N9L9 421 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 OR1L3Q8NH93 324 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 PROKR1Q8TCW9 393 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 NUDT8Q8WV74 236 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 CMTM5Q96DZ9 223 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 C11orf24Q96F05 449 aaPredicted RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 SMIM10Q96HG1 83 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 TEX37Q96LM6 180 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 TMEM74Q96NL1 305 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 ANKHQ9HCJ1 492 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 FGF21Q9NSA1 209 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 FBXW2Q9UKT8 454 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 WDFY4Q6ZS81 3184 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 LAMA1P25391 3075 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 A0A0A6YYD5 115 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 FAM234BA2RU67 622 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 B3GALT2O43825 422 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 KLHL18O94889 574 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 IL3P08700 152 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 FAM58BPP0C7Q3 252 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 PCSK2P16519 638 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 IL12AP29459 219 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 PRDX6P30041 224 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 MRPL19P49406 292 aaKnown RBP16.58■□□□□ 0.24
RNF4-209ENST00000507784 CLNS1AP54105 237 aaKnown RBP16.58■□□□□ 0.24
RNF4-209ENST00000507784 ITGA1P56199 1179 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 MXRA7P84157 204 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 TRA2AQ13595 282 aaKnown RBP eCLIP16.58■□□□□ 0.24
RNF4-209ENST00000507784 PGS1Q32NB8 556 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 MMEL1Q495T6 779 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 B3GNT8Q7Z7M8 397 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 FUNDC1Q8IVP5 155 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 RP9Q8TA86 221 aaKnown RBP16.58■□□□□ 0.24
RNF4-209ENST00000507784 ZNF285Q96NJ3 590 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 OR6C1Q96RD1 312 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 SERINC2Q96SA4 455 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 ACTL8Q9H568 366 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 MYNNQ9NPC7 610 aa16.58■□□□□ 0.24
RNF4-209ENST00000507784 ZNF860A6NHJ4 632 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 EFCAB7A8K855 629 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 ANKRD28O15084 1053 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 TMPRSS11DO60235 418 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 COX7A2P14406 83 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 PRPS1L1P21108 318 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 JAK1P23458 1154 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 HPCAL1P37235 193 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 TSFMP43897 325 aaKnown RBP16.57■□□□□ 0.24
RNF4-209ENST00000507784 ALDH9A1P49189 494 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 SNRPNP63162 240 aaKnown RBP16.57■□□□□ 0.24
RNF4-209ENST00000507784 OLR1P78380 273 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 MC1RQ01726 317 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 ZFP36L1Q07352 338 aaKnown RBP16.57■□□□□ 0.24
RNF4-209ENST00000507784 HERC3Q15034 1050 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 PRSS41Q7RTY9 318 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 KIAA2013Q8IYS2 634 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 EFCAB3Q8N7B9 438 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 TM4SF18Q96CE8 201 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 ZNF501Q96CX3 271 aaPredicted RBP16.57■□□□□ 0.24
RNF4-209ENST00000507784 SLC7A5P2Q9GIP4 190 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 OCIAD1Q9NX40 245 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 LYARQ9NX58 379 aaKnown RBP16.57■□□□□ 0.24
RNF4-209ENST00000507784 AKAP7Q9P0M2 348 aaPredicted RBP16.57■□□□□ 0.24
RNF4-209ENST00000507784 NDOR1Q9UHB4 597 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 RARRES3Q9UL19 164 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 NAALAD2Q9Y3Q0 740 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 SLC22A7Q9Y694 548 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 USP34Q70CQ2 3546 aa16.57■□□□□ 0.24
RNF4-209ENST00000507784 A0A0A6YYC8 382 aaPredicted RBP16.56■□□□□ 0.24
RNF4-209ENST00000507784 CCDC154A6NI56 674 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 I3L1I5 382 aaPredicted RBP16.56■□□□□ 0.24
RNF4-209ENST00000507784 SGK494L7N484 410 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 PRMT3O60678 531 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 GUCY1B2O75343 617 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 CALB2P22676 271 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 S100A3P33764 101 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 DGKQP52824 942 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 TRA2BP62995 288 aaKnown RBP16.56■□□□□ 0.24
RNF4-209ENST00000507784 INSM1Q01101 510 aaPredicted RBP16.56■□□□□ 0.24
RNF4-209ENST00000507784 BNIP1Q12981 228 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 STX5Q13190 355 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 RUNX2Q13950 521 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 C16orf72Q14CZ0 275 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 MUM1Q2TAK8 710 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 FAM214AQ32MH5 1076 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 VPS26BQ4G0F5 336 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 GARNL3Q5VVW2 1013 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 FAM71E1Q6IPT2 247 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 ANKRD26P1Q6NSI1 321 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 TLDC1Q6P9B6 456 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 BLOC1S3Q6QNY0 202 aa16.56■□□□□ 0.24
RNF4-209ENST00000507784 ZCCHC7Q8N3Z6 543 aaKnown RBP16.56■□□□□ 0.24
RNF4-209ENST00000507784 METTL27Q8N6F8 245 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms