RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	ST8SIA2	Q92186	375 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	P2RX5	Q93086	422 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	PPP1R14A	Q96A00	147 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	CREB3L1	Q96BA8	519 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	RCC1L	Q96I51	464 aa	Known RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	KAZALD1	Q96I82	304 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	LRIG1	Q96JA1	1093 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	TAAR1	Q96RJ0	339 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	RAD9A	Q99638	391 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	TREX2	Q9BQ50	279 aa	Predicted RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZSWIM1	Q9BR11	485 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	TRIM51	Q9BSJ1	452 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	FUNDC2	Q9BWH2	189 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	ADGRE3	Q9BY15	652 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	CPEB1	Q9BZB8	566 aa	Known RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	OR51B6	Q9H340	312 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	ELOVL6	Q9H5J4	265 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	ADAP2	Q9NPF8	381 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	DYRK4	Q9NR20	520 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	TAS2R3	Q9NYW6	316 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	COL20A1	Q9P218	1284 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	IFT80	Q9P2H3	777 aa	Predicted RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	EIF2B4	Q9UI10	523 aa	Known RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZNF639	Q9UID6	485 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	OSGIN1	Q9UJX0	560 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	INTS6	Q9UL03	887 aa	Known RBP	4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	LYVE1	Q9Y5Y7	322 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	HCFC2	Q9Y5Z7	792 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	ALK	Q9UM73	1620 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	CROCC	Q5TZA2	2017 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	TRPM2	O94759	1503 aa		4.92	□□□□□ -1.62
TUSC3-205	ENST00000507316	PTPRF	P10586	1907 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	CHD4	Q14839	1912 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	TEX13C	A0A0J9YWL9	993 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ATP6AP2	A0A1C7CYW4	349 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316		A0A1W2PPL8	197 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ASB14	A6NK59	587 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	AQP12B	A6NM10	295 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	DRGX	A6NNA5	263 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZNF99	A8MXY4	864 aa	Predicted RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PDHX	O00330	501 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	DCLK1	O15075	740 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	SMPD2	O60906	423 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	H2AFY	O75367	372 aa	Known RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	RPP40	O75818	363 aa	Known RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	EIF3G	O75821	320 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	SCO1	O75880	301 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PIAS2	O75928	621 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	SRP72	O76094	671 aa	Known RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PGK1	P00558	417 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	HPR	P00739	348 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	F9	P00740	461 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	F10	P00742	488 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ADA	P00813	363 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ITGAV	P06756	1048 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	CSF1R	P07333	972 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	FGF4	P08620	206 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	HCK	P08631	526 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	IGFBP1	P08833	259 aa	Predicted RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	FGF2	P09038	288 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	RNF224	P0DH78	156 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ERVK-10	P10266	1014 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	IFI30	P13284	250 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZNF250	P15622	560 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PVALB	P20472	110 aa	Predicted RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	CYP2B6	P20813	491 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	HNF1A	P20823	631 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	S1PR1	P21453	382 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	IGFBP5	P24593	272 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	MYL9	P24844	172 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	CALCR	P30988	508 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PMEL	P40967	661 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	CSK	P41240	450 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PIK3CB	P42338	1070 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	DPP6	P42658	865 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	GDF5	P43026	501 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	MCAM	P43121	646 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	CDKN1B	P46527	198 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	EPHA5	P54756	1037 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	CASP9	P55211	416 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	MAZ	P56270	477 aa	Known RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	HUNK	P57058	714 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	TAS2R40	P59535	323 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PRPS1	P60891	318 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	RAP1B	P61224	184 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PKIA	P61925	76 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	NUTF2	P61970	127 aa	Known RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ARF6	P62330	175 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ERVK-25	P63136	954 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	SUMO1	P63165	101 aa	Known RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	PSPH	P78330	225 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	SORD	Q00796	357 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	GRB10	Q13322	594 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	KRT33B	Q14525	404 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	QPRT	Q15274	297 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	MAPK11	Q15759	364 aa		4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	USF2	Q15853	346 aa	Predicted RBP	4.91	□□□□□ -1.62
TUSC3-205	ENST00000507316	ZNF239	Q16600	458 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms