RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 OCC1Q8TAD7 63 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 ROBO4Q8WZ75 1007 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 KIFAP3Q92845 792 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 SNRNP40Q96DI7 357 aaKnown RBP4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 PABPC5Q96DU9 382 aaKnown RBP4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 SPACA9Q96E40 222 aaPredicted RBP4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 GIMAP5Q96F15 307 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 CFAP36Q96G28 342 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 IGSF21Q96ID5 467 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 ATP6V1G3Q96LB4 118 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 GDAP1L1Q96MZ0 367 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 FRG2BQ96QU4 278 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 ACCSQ96QU6 501 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 ZNF577Q9BSK1 485 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 LRRC1Q9BTT6 524 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 ABHD6Q9BV23 337 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 OSBPL8Q9BZF1 889 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 NPFFR1Q9GZQ6 430 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 RNPEPL1Q9HAU8 725 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 NGBQ9NPG2 151 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 TCF7L2Q9NQB0 619 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 HOMER3Q9NSC5 361 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 PNPLA3Q9NST1 481 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 DMAC2Q9NW81 257 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 UVRAGQ9P2Y5 699 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 COPG2Q9UBF2 871 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 MTRF1LQ9UGC7 380 aaKnown RBP4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 FBXO40Q9UH90 709 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 MTUS1Q9ULD2 1270 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
CALCOCO2-208ENST00000506971 PHIPQ8WWQ0 1821 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 BRCA1P38398 1863 aaKnown RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 FER1L6Q2WGJ9 1857 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 A0A096LPK6 155 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 GOLGA6L7A0A1B0GV03 622 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 ELOVL7A1L3X0 281 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 ARHGAP42A6NI28 874 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 TMCO5BA8MYB1 307 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 NPIPB11E5RHQ5 1161 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 NDUFAB1O14561 156 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SMAD9O15198 467 aaKnown RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 CLDN3O15551 220 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SEC14L5O43304 696 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 BUB1O43683 1085 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SSX5O60225 188 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SLITRK3O94933 977 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 AK1P00568 194 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 GH1P01241 217 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 GH2P01242 217 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 HIST1H2ABP04908 130 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 MMP10P09238 476 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 NUDT17P0C025 328 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 C8orf89P0DMQ9 161 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 TFPIP10646 304 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 VPREB1P12018 145 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SLC2A4P14672 509 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 AREGP15514 252 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 IL7RP16871 459 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 ZNF12P17014 697 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 GJA1P17302 382 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 GNAZP19086 355 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 NR1D1P20393 614 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 HIST1H2ADP20671 130 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 EEF1B2P24534 225 aaKnown RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 ACADLP28330 430 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 RDXP35241 583 aaKnown RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 RPL3P39023 403 aaKnown RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 PTPN9P43378 593 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 QARSP47897 775 aaKnown RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 KCNJ1P48048 391 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 PITPNBP48739 271 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 FNTAP49354 379 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 PEX5P50542 639 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 CLCN3P51790 818 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SEC61A1P61619 476 aaKnown RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SIRPAP78324 504 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 PMP22Q01453 160 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 GCNT1Q02742 428 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 GUCY2DQ02846 1103 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 CAV1Q03135 178 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 PRKCZQ05513 592 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 ACSM1Q08AH1 577 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 LPIN1Q14693 890 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 DRAP1Q14919 205 aaPredicted RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 RPE65Q16518 533 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 UGCGQ16739 394 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 KIF19Q2TAC6 998 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 ZNF718Q3SXZ3 478 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 FAM76BQ5HYJ3 339 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 OTUD3Q5T2D3 398 aaPredicted RBP4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 SEL1L2Q5TEA6 688 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 TMEM211Q6ICI0 200 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 ARHGAP11AQ6P4F7 1023 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 MOB3CQ70IA8 216 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 HIST3H2AQ7L7L0 130 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 TSPAN33Q86UF1 283 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 TRIM74Q86UV6 250 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 TRIM73Q86UV7 250 aa4.1□□□□□ -1.75
CALCOCO2-208ENST00000506971 NT5DC3Q86UY8 548 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms