RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 MRPL52Q86TS9 123 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 TRABD2AQ86V40 505 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 AVL9Q8NBF6 648 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 DNAJB14Q8TBM8 379 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 HEXDCQ8WVB3 486 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 PRPF31Q8WWY3 499 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 FAM122AQ96E09 287 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 PDLIM5Q96HC4 596 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 TGS1Q96RS0 853 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 FDXACB1Q9BRP7 624 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ADPGKQ9BRR6 497 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 MRPL4Q9BYD3 311 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ROGDIQ9GZN7 287 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 WWP1Q9H0M0 922 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 C1orf112Q9NSG2 853 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ZDHHC3Q9NYG2 299 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 B3GALT5Q9Y2C3 310 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 C12orf71A8MTZ7 269 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 H7C0S8 307 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 PGRMC1O00264 195 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ATP2C2O75185 946 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SNNO75324 88 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 LRCH4O75427 683 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 EIF3GO75821 320 aaKnown RBP eCLIP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SCO1O75880 301 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ACSL3O95573 720 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 OR8G3PP0DMU2 310 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 FOLR1P15328 257 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 EPHA5P54756 1037 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RPS26P62854 115 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 LIPEQ05469 1076 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SPOCK1Q08629 439 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ASAH1Q13510 395 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 PLCL1Q15111 1095 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SLC36A3Q495N2 470 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 IFI44LQ53G44 452 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 DGKKQ5KSL6 1271 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RARS2Q5T160 578 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RAB12Q6IQ22 244 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RGS7BPQ6MZT1 257 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 TIGD7Q6NT04 549 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SLC25A24Q6NUK1 477 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ZFP1Q6P2D0 407 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 CCDC137Q6PK04 289 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 PDIK1LQ8N165 341 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 CLEC4FQ8N1N0 589 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 DNERQ8NFT8 737 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 KBTBD8Q8NFY9 601 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 TSPAN14Q8NG11 270 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ELP5Q8TE02 316 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SLC46A1Q96NT5 459 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 OR2A14Q96R47 310 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ATP6V0BQ99437 205 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 TEAD3Q99594 435 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 AGPAT1Q99943 283 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RTP3Q9BQQ7 232 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 EBF4Q9BQW3 602 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ZNF416Q9BWM5 594 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 TMEM120AQ9BXJ8 343 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 METTL9Q9H1A3 318 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 BRF2Q9HAW0 419 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 MAT2BQ9NZL9 334 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 XPR1Q9UBH6 696 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ABCG2Q9UNQ0 655 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 HS3ST4Q9Y661 456 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 MYH11P35749 1972 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SMIM23A6NLE4 172 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 IFITM10A6NMD0 228 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 A6NNC1 897 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 OGTO15294 1046 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RGS16O15492 202 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 B4GAT1O43505 415 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 CTNSO60931 367 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ERN1O75460 977 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ITGA10O75578 1167 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 KRT19P08727 400 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 FSTP19883 344 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 S100PP25815 95 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 PTGER3P43115 390 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 MANFP55145 182 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 STX17P56962 302 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 CD81P60033 236 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RPL11P62913 178 aaKnown RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RING1Q06587 406 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 LMAN2Q12907 356 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 BNIP2Q12982 314 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 RAB39AQ14964 217 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 PGM5Q15124 567 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 IRF4Q15306 451 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 KIF19Q2TAC6 998 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 AASDHQ4L235 1098 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 DNAL1Q4LDG9 190 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 TEX44Q53QW1 395 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 NHLRC3Q5JS37 347 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 ZNF468Q5VIY5 522 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-205ENST00000506154 SLC9A4Q6AI14 798 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 FRMD7Q6ZUT3 714 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 AMIGO2Q86SJ2 522 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 NOXA1Q86UR1 476 aa2.18□□□□□ -2.06
NEDD4-205ENST00000506154 APOBEC3FQ8IUX4 373 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms