RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CLCA4Q14CN2 919 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 SATL1Q86VE3 508 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ARL10Q8N8L6 244 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 DOHHQ9BU89 302 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 FAIM2Q9BWQ8 316 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZNF576Q9H609 170 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ACSS1Q9NUB1 689 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 MOSPD1Q9UJG1 213 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 PADI2Q9Y2J8 665 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZNF451Q9Y4E5 1061 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 CHD9Q3L8U1 2897 aa16.5■□□□□ 0.23
TRAPPC11-204ENST00000505676 PLOD2O00469 737 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 PDPK1O15530 556 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 PRICKLE3O43900 615 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 ATP6V1B1P15313 513 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 POU3F3P20264 500 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 CHI3L1P36222 383 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 FRKP42685 505 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 ESRRGP62508 458 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 TOP3AQ13472 1001 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 NADK2Q4G0N4 442 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 RBM48Q5RL73 367 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 DUS1LQ6P1R4 473 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 SPESP1Q6UW49 350 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 C8orf59Q8N0T1 100 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 C2orf73Q8N5S3 287 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZFPM2Q8WW38 1151 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 TM4SF18Q96CE8 201 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZBED6CLQ96FA7 236 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 HSH2DQ96JZ2 352 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZNF347Q96SE7 839 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 SNX7Q9UNH6 387 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 ANGPT4Q9Y264 503 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 SLC31A1O15431 190 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 FKBP9O95302 570 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 ITGAMP11215 1152 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 AKT2P31751 481 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 CRATP43155 626 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 PRIM2P49643 509 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 MVDP53602 400 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 NUMA1Q14980 2115 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 CNPY1Q3B7I2 92 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 THAP5Q7Z6K1 395 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 SLC6A16Q9GZN6 736 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 FGF22Q9HCT0 170 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 TAAR2Q9P1P5 351 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 BLOC1S6Q9UL45 172 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 MMP17Q9ULZ9 603 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 HS3ST3A1Q9Y663 406 aa16.49■□□□□ 0.23
TRAPPC11-204ENST00000505676 TBX6O95947 436 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 GNAO1P09471 354 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 ITGA2P17301 1181 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 NUDT1P36639 197 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 PPP2CBP62714 309 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 PPP2CAP67775 309 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 TGM3Q08188 693 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 SPIDRQ14159 915 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZIC1Q15915 447 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 ADPRMQ3LIE5 342 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 OR4C11Q6IEV9 310 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 LMNTD1Q8N9Z9 388 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 CREB3L4Q8TEY5 395 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 F2RL3Q96RI0 385 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 EPYCQ99645 322 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 GRIP2Q9C0E4 1043 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 REEP1Q9H902 201 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 C1GALT1Q9NS00 363 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 HSPE1-MOB4S4R3N1 261 aa16.48■□□□□ 0.23
TRAPPC11-204ENST00000505676 SLC16A6O15403 523 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 PAX7P23759 505 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 MAT2AP31153 395 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 SELENOWP63302 87 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 MC1RQ01726 317 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 MPEG1Q2M385 716 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 CRB2Q5IJ48 1285 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 ADCK2Q7Z695 626 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 NAGSQ8N159 534 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 METTL25Q8N6Q8 603 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 SETD9Q8NE22 299 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 PSMA8Q8TAA3 256 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 NEURL3Q96EH8 262 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 FBXL20Q96IG2 436 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 TOR3AQ9H497 397 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 VCX3AQ9NNX9 186 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 FAM118AQ9NWS6 357 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 TRNAU1APQ9NX07 287 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 UGT2B11O75310 529 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 GBAP04062 536 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 NTRK1P04629 796 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 ARAFP10398 606 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 PSMB5P28074 263 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 SCARB2Q14108 478 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 KIAA1324Q6UXG2 1013 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 ANGPTL8Q6UXH0 198 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 OR2L3Q8NG85 312 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 CIDECQ96AQ7 238 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 DPH2Q9BQC3 489 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 ING2Q9H160 280 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms