RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GPR78Q96P69 363 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 SH3GL3Q99963 347 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 PCDHB14Q9Y5E9 798 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 H7C0S8 307 aa13.52□□□□□ -0.24
TCOF1-207ENST00000504761 PRG2P13727 222 aa13.52□□□□□ -0.24
TCOF1-207ENST00000504761 MATN1P21941 496 aa13.52□□□□□ -0.24
TCOF1-207ENST00000504761 TTKP33981 857 aa13.52□□□□□ -0.24
TCOF1-207ENST00000504761 LILRA6Q6PI73 481 aa13.52□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF740Q8NDX6 193 aa13.52□□□□□ -0.24
TCOF1-207ENST00000504761 C1orf105O95561 183 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 NPPAP01160 153 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 ALOX5P09917 674 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 HSD3B1P14060 373 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 HOXB6P17509 224 aaKnown RBP13.52□□□□□ -0.25
TCOF1-207ENST00000504761 HSD3B2P26439 372 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 KDELR2P33947 212 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 CLK3P49761 638 aaKnown RBP13.52□□□□□ -0.25
TCOF1-207ENST00000504761 CTBSQ01459 385 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 GRIK2Q13002 908 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 Q6ZNB5 142 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 RDH14Q9HBH5 336 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 FAM25AB3EWG3 89 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 FAM25CB3EWG5 89 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 FAM25GB3EWG6 89 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 RGS10O43665 173 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 H6PDO95479 791 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 MTHFD2P13995 350 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 TACR1P25103 407 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 CTHP32929 405 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 HK3P52790 923 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 NUDT6P53370 316 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 INHBCP55103 352 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 DEFA1P59665 94 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 DEFA3P59666 94 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 GRHL2Q6ISB3 625 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 FAM92BQ6ZTR7 304 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 PDZD3Q86UT5 571 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 ENDOVQ8N8Q3 282 aaKnown RBP13.52□□□□□ -0.25
TCOF1-207ENST00000504761 PLA2G15Q8NCC3 412 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 OR2L2Q8NH16 312 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 ADAMTS19Q8TE59 1207 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 DGCR14Q96DF8 476 aaKnown RBP13.52□□□□□ -0.25
TCOF1-207ENST00000504761 ZHX1-C8orf76Q96EF9 292 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 NODALQ96S42 347 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 RHBDL2Q9NX52 303 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.25
TCOF1-207ENST00000504761 GPR34Q9UPC5 381 aa13.52□□□□□ -0.25
TCOF1-207ENST00000504761 SOX14O95416 240 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 VNN2O95498 520 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 RANBP1P43487 201 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 ZNF267Q14586 743 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 WDR45BQ5MNZ6 344 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 CDC73Q6P1J9 531 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 VTCN1Q7Z7D3 282 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 TMC8Q8IU68 726 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 OR8J3Q8NGG0 315 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 GRHL3Q8TE85 626 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 OR8D2Q9GZM6 311 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 C8orf4Q9NR00 106 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 THUMPD1Q9NXG2 353 aaKnown RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 PHF11Q9UIL8 331 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 DNAJA1P31689 397 aaKnown RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 RAPSNQ13702 412 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 CRB2Q5IJ48 1285 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 COMMD2Q86X83 199 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 PDLIM5Q96HC4 596 aaKnown RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 GORASP1Q9BQQ3 440 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 NDC1Q9BTX1 674 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 GPR45Q9Y5Y3 372 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 TET1Q8NFU7 2136 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 FOCADQ5VW36 1801 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 MICAL3Q7RTP6 2002 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 KHDRBS2Q5VWX1 349 aaKnown RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 RTL4Q6ZR62 310 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 OR4K14Q8NGD5 310 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 MTERF3Q96E29 417 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 DGAT2Q96PD7 388 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 NTMT1Q9BV86 223 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 CPSF4LA6NMK7 179 aaKnown RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 PRMT3O60678 531 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 SERPINB1P30740 379 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 PCDH1Q08174 1060 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 DGUOKQ16854 277 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 ENPP6Q6UWR7 440 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 OR52E1Q8NGJ3 308 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 PROKR1Q8TCW9 393 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 C16orf78Q8WTQ4 265 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 NUDT8Q8WV74 236 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 GEMIN6Q8WXD5 167 aaKnown RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 ZUFSPQ96AP4 578 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 ZNF419Q96HQ0 510 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 CXorf21Q9HAI6 301 aa13.51□□□□□ -0.25
TCOF1-207ENST00000504761 THAP10Q9P2Z0 257 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-207ENST00000504761 ZDBF2Q9HCK1 2354 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms