RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CD38P28907 300 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 PXNP49023 591 aaPredicted RBP20.97■□□□□ 0.95
PTPN13-205ENST00000502971 RPS15AP62244 130 aaKnown RBP20.97■□□□□ 0.95
PTPN13-205ENST00000502971 SLC14A1Q13336 389 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 MPEG1Q2M385 716 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 FAM98BQ52LJ0 330 aaKnown RBP20.97■□□□□ 0.95
PTPN13-205ENST00000502971 MAMSTRQ6ZN01 415 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 ZNF551Q7Z340 670 aaPredicted RBP20.97■□□□□ 0.95
PTPN13-205ENST00000502971 RBM12BQ8IXT5 1001 aaKnown RBP20.97■□□□□ 0.95
PTPN13-205ENST00000502971 TRIML2Q8N7C3 387 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 FAM47BQ8NA70 645 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 SRFBP1Q8NEF9 429 aaKnown RBP20.97■□□□□ 0.95
PTPN13-205ENST00000502971 MS4A6EQ96DS6 147 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 NECAB3Q96P71 396 aaPredicted RBP20.97■□□□□ 0.95
PTPN13-205ENST00000502971 OR2A14Q96R47 310 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 ANKMY1Q9P2S6 941 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 ENTPD2Q9Y5L3 495 aa20.97■□□□□ 0.95
PTPN13-205ENST00000502971 A0A0A6YYD5 115 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 A0A1W2PR77 199 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 TNFSF14O43557 240 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 FKBP9O95302 570 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 ABCB1P08183 1280 aaPredicted RBP20.96■□□□□ 0.95
PTPN13-205ENST00000502971 CELA2BP08218 269 aaPredicted RBP20.96■□□□□ 0.95
PTPN13-205ENST00000502971 UQCRBP14927 111 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 HOXB6P17509 224 aaKnown RBP20.96■□□□□ 0.95
PTPN13-205ENST00000502971 JUNDP17535 347 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 SSR2P43308 183 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 HYAL2Q12891 473 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 NAGSQ8N159 534 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 NCLNQ969V3 563 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 CIDECQ96AQ7 238 aaPredicted RBP20.96■□□□□ 0.95
PTPN13-205ENST00000502971 CENPNQ96H22 339 aaPredicted RBP20.96■□□□□ 0.95
PTPN13-205ENST00000502971 SLC6A16Q9GZN6 736 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 AICDAQ9GZX7 198 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 YY1AP1Q9H869 796 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 OLAHQ9NV23 265 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 ACTR10Q9NZ32 417 aa20.96■□□□□ 0.95
PTPN13-205ENST00000502971 APOBEC3BQ9UH17 382 aaKnown RBP20.96■□□□□ 0.95
PTPN13-205ENST00000502971 A0A1W2PRB8 838 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 OR6C74A6NCV1 312 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 KCNK5O95279 499 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 C6orf47O95873 294 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 RAP2AP10114 183 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 UGT2B7P16662 529 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 IL1RNP18510 177 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 TSFMP43897 325 aaKnown RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 HSPA13P48723 471 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 PLA2G16P53816 162 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 RACK1P63244 317 aaKnown RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 HBA1P69905 142 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 CHRNB3Q05901 458 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 SLC37A2Q8TED4 501 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 PATE1Q8WXA2 126 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 RNF145Q96MT1 663 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 KCNC2Q96PR1 638 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 SEPHS2Q99611 448 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 CHID1Q9BWS9 393 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 KLHL31Q9H511 634 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 CAAP1Q9H8G2 361 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 DCAF13Q9NV06 445 aaKnown RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 TAS2R9Q9NYW1 312 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 KLHL20Q9Y2M5 609 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 MUC3AQ02505 3323 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 OR2A25A4D2G3 310 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 MAP3K13O43283 966 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 TMPRSS11DO60235 418 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 WNT1P04628 370 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 HOXB3P14651 431 aaPredicted RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 ZNF26P17031 533 aaPredicted RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 STXBP1P61764 594 aaKnown RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 GAB1Q13480 694 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 ATP6AP1Q15904 470 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 PRSS53Q2L4Q9 553 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 VMACQ2NL98 169 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 IRGCQ6NXR0 463 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 ZCCHC8Q6NZY4 707 aaKnown RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 ZZZ3Q8IYH5 903 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 DEFB119Q8N690 84 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 OR2L5Q8NG80 312 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 SPACA7Q96KW9 195 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 TEFMQ96QE5 360 aaKnown RBP20.95■□□□□ 0.94
PTPN13-205ENST00000502971 C17orf62Q9BQA9 187 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 LRRC61Q9BV99 259 aa20.95■□□□□ 0.94
PTPN13-205ENST00000502971 GSAPA4D1B5 854 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 C2orf74A8MZ97 194 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 TPST1O60507 370 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 CSF2P04141 144 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 DRD2P14416 443 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 POLR2CP19387 275 aaPredicted RBP20.94■□□□□ 0.94
PTPN13-205ENST00000502971 RPL6Q02878 288 aaKnown RBP20.94■□□□□ 0.94
PTPN13-205ENST00000502971 TGM3Q08188 693 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 C1orf61Q13536 156 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 SLC5A12Q1EHB4 618 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 TOR1AIP1Q5JTV8 583 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 TRIM40Q6P9F5 258 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 ABHD17CQ6PCB6 329 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 SLC36A4Q6YBV0 504 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 MMP21Q8N119 569 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 OR10G6Q8NH81 332 aa20.94■□□□□ 0.94
PTPN13-205ENST00000502971 NETO1Q8TDF5 533 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms