RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ATG10Q9H0Y0 220 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CXXC4Q9H2H0 198 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 EHD1Q9H4M9 534 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 ZDHHC11Q9H8X9 412 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 POPDC3Q9HBV1 291 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 TIMMDC1Q9NPL8 285 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 KLHL1Q9NR64 748 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 ARL15Q9NXU5 204 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 GPRC5BQ9NZH0 403 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 SH2B3Q9UQQ2 575 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 VWA7Q9Y334 891 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 KCNE2Q9Y6J6 123 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CELSR1Q9NYQ6 3014 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 EML6Q6ZMW3 1958 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 DNAJC13O75165 2243 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 LRIT2A6NDA9 550 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 OR2W5A6NFC9 320 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM47E-STBD1D6RA91 191 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM227AF5H4B4 570 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 PSMD12O00232 456 aaPredicted RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 CLDN4O14493 209 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 BCKDKO14874 412 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 TFECO14948 347 aaPredicted RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 PEX1O43933 1283 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 SUSD5O60279 629 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ITGA10O75578 1167 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 CLEC3AO75596 197 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 CDC123O75794 336 aaPredicted RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ZFAND5O76080 213 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 TOXO94900 526 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 GLSO94925 669 aaPredicted RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 TUBB4AP04350 444 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF888P0CJ79 500 aaPredicted RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF37AP17032 561 aaPredicted RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 GGT5P36269 586 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 MEOX1P50221 254 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ARFIP1P53367 373 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 CDKN2DP55273 166 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 RAB38P57729 211 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 BTG2P78543 158 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 PCDH1Q08174 1060 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 EFTUD2Q15029 972 aaKnown RBP eCLIP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ELAVL1Q15717 326 aaKnown RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 EMC4Q5J8M3 183 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 TEDDM1Q5T9Z0 273 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 HECTD2Q5U5R9 776 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 STEAP4Q687X5 459 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 NXPE4Q6UWF7 544 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 LRRC8AQ8IWT6 810 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 DND1Q8IYX4 353 aaKnown RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 SHISA5Q8N114 240 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 CYP4Z2PQ8N1L4 340 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 CA13Q8N1Q1 262 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 TCAIMQ8N3R3 496 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 TMEM132CQ8N3T6 1108 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 MARVELD2Q8N4S9 558 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 NKAPQ8N5F7 415 aaKnown RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ANKRD53Q8N9V6 530 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 MORN4Q8NDC4 146 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 PSD4Q8NDX1 1056 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ZCCHC10Q8TBK6 192 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 RND1Q92730 232 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 DAZLQ92904 295 aaKnown RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 SDCCAG3Q96C92 435 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 WDR34Q96EX3 536 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 LINGO1Q96FE5 620 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 SGCZQ96LD1 299 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 NDNQ99608 321 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 MCMBPQ9BTE3 642 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ADAP2Q9NPF8 381 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 KCNJ16Q9NPI9 418 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 IARS2Q9NSE4 1012 aaKnown RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ANKRD10Q9NXR5 420 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ZFATQ9P243 1243 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 MYOTQ9UBF9 498 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 VTI1BQ9UEU0 232 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 SH3BGRL2Q9UJC5 107 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 TSR3Q9UJK0 312 aaKnown RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF223Q9UK11 482 aaPredicted RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 PPT2Q9UMR5 302 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 MRPS33Q9Y291 106 aaKnown RBP5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 DYRK1BQ9Y463 629 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 OARD1Q9Y530 152 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 HIVEP1P15822 2718 aa5.69□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF407Q9C0G0 2248 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 INTS1Q8N201 2190 aaKnown RBP5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 GOLGA6L10A0A0M3HER8 536 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 A0A1B0GTH9 108 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 TMEM200CA6NKL6 621 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 FIGNL2A6NMB9 653 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 USP27XA6NNY8 438 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 ACOT7O00154 380 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 PGRMC1O00264 195 aaKnown RBP5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 CYR61O00622 381 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 DNALI1O14645 258 aaPredicted RBP5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 KLK8O60259 260 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 B4GALT2O60909 372 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 CTNSO60931 367 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 WDR1O75083 606 aa5.68□□□□□ -1.5
LSM3P4-201ENST00000502948 H2AFYO75367 372 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms