RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TRPV3Q8NET8 790 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 CCDC110Q8TBZ0 833 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 SPATA18Q8TC71 538 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 UBTD2Q8WUN7 234 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 FCAMRQ8WWV6 532 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 ESAMQ96AP7 390 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 NXPE2Q96DL1 559 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 THOC3Q96J01 351 aaKnown RBP4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 LMLNQ96KR4 655 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 MEIS3Q99687 375 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 THAP2Q9H0W7 228 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 TRPV6Q9H1D0 765 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 POLE3Q9NRF9 147 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 INTS9Q9NV88 658 aaKnown RBP4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 NDUFA13Q9P0J0 144 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 AURKCQ9UQB9 309 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 HECW2Q9P2P5 1572 aa4.74□□□□□ -1.65
HMGB1P3-201ENST00000502802 UBE4BO95155 1302 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 FAM205AQ6ZU69 1335 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 FHOD3Q2V2M9 1422 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 BCORL1Q5H9F3 1711 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZNF732B4DXR9 585 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 CIDEAO60543 219 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 SMPD2O60906 423 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 SOCS5O75159 536 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 PTBP3O95758 552 aaKnown RBP4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 PDGFBP01127 241 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 HEXBP07686 556 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 AMD1P17707 334 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 STIP1P31948 543 aaKnown RBP4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 PITPNBP48739 271 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZNF131P52739 623 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 OR1D5P58170 312 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 CCZ1BP86790 482 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 CCZ1P86791 482 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 CDR2Q01850 454 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 SGCGQ13326 291 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 ITGA9Q13797 1035 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 HSP90AA5PQ58FG0 334 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 HERC4Q5GLZ8 1057 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 TMEM207Q6UWW9 146 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 MACC1Q6ZN28 852 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 KLHDC9Q8NEP7 349 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 OR4C3Q8NH37 302 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 HPSE2Q8WWQ2 592 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 C14orf79Q96F83 325 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 LPAR4Q99677 370 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 SPAG8Q99932 426 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 UBAC1Q9BSL1 405 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 HIPK2Q9H2X6 1198 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 MARCH7Q9H992 704 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 NGBQ9NPG2 151 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 FAM153AQ9UHL3 310 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 TEKT2Q9UIF3 430 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 ELF5Q9UKW6 265 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 SATB2Q9UPW6 733 aa4.73□□□□□ -1.65
HMGB1P3-201ENST00000502802 SIGLEC1Q9BZZ2 1709 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 KPNA7A9QM74 516 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 KLF11O14901 512 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 MLNRO43193 412 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 NTN1O95631 604 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 NGFP01138 241 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 EPOP01588 193 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 GPIP06744 558 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 SFTPBP07988 381 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 GSTA2P09210 222 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ODC1P11926 461 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ANPEPP15144 967 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ITGB6P18564 788 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ITGA3P26006 1051 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 GJB2P29033 226 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 MARCKSP29966 332 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 CCND2P30279 289 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 CHRNA3P32297 505 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 SLC1A3P43003 542 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 KCNK10P57789 538 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 SSTP61278 116 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 GABPAQ06546 454 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 KLHL30Q0D2K2 578 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 CEACAM7Q14002 265 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 KARSQ15046 597 aaKnown RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 SPHARQ15513 63 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 TAF7Q15545 349 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZNF776Q68DI1 518 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZNF324BQ6AW86 544 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 RAET1GQ6H3X3 334 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 UNC5DQ6UXZ4 953 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 RBMS3Q6XE24 437 aaKnown RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 FCRLAQ7L513 359 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 TRMT11Q7Z4G4 463 aaKnown RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZNF575Q86XF7 245 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 CIARTQ8N365 385 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 OR1L3Q8NH93 324 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 GANCQ8TET4 914 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 SCARB1Q8WTV0 552 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 TM9SF4Q92544 642 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 RAB17Q9H0T7 212 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ATG10Q9H0Y0 220 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 MTIF3Q9H2K0 278 aaKnown RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 RWDD1Q9H446 243 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms