RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 UBQLN3Q9H347 655 aa1.94□□□□□ -2.1
SMAD1-203ENST00000502342 SWAP70Q9UH65 585 aa1.94□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF107Q9UII5 783 aaPredicted RBP1.94□□□□□ -2.1
SMAD1-203ENST00000502342 VSIG4Q9Y279 399 aa1.94□□□□□ -2.1
SMAD1-203ENST00000502342 PCDHGA1Q9Y5H4 931 aa1.94□□□□□ -2.1
SMAD1-203ENST00000502342 HCFC1P51610 2035 aa1.94□□□□□ -2.1
SMAD1-203ENST00000502342 KLLNB2CW77 178 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF732B4DXR9 585 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 E9PAM4 449 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 FAM86B1E9PN63 330 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 LMO7DNF2Z398 122 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 TXNL1O43396 289 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 FCGR3BO75015 233 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 GBAP04062 536 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 APOA4P06727 396 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 VIMP08670 466 aaKnown RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 FAM86B2P0C5J1 330 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 ANKRD34CP0C6C1 535 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 DLATP10515 647 aaKnown RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 KLK2P20151 261 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 SLC1A4P43007 532 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 GMPSP49915 693 aaPredicted RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 NPY4RP50391 375 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 CRYBA2P53672 197 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 RAD23AP54725 363 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 CETN1Q12798 172 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 SIX1Q15475 284 aaPredicted RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 ECSCRQ19T08 205 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 KNOP1Q1ED39 458 aaKnown RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 RNF212Q495C1 297 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 C9orf66Q5T8R8 295 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 LEMD1Q68G75 181 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 SLC27A4Q6P1M0 643 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 EMBQ6PCB8 327 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 C17orf107Q6ZR85 190 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 GPR141Q7Z602 305 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 RPAINQ86UA6 219 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 HIPK1Q86Z02 1210 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 ZC3H3Q8IXZ2 948 aaKnown RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 CSNK1G2-AS1Q8NCQ2 148 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 Q8NFD4 153 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 OR4Q3Q8NH05 313 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 SETD6Q8TBK2 473 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 AGAP11Q8TF27 550 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 ST6GALNAC6Q969X2 333 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF274Q96GC6 653 aaPredicted RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 SERAC1Q96JX3 654 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 LURAP1Q96LR2 239 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 C1orf147Q96MC9 270 aaPredicted RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 TNFRSF13CQ96RJ3 184 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 MARCH7Q9H992 704 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 PLEKHA3Q9HB20 300 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 UBE2TQ9NPD8 197 aaPredicted RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 MRGBPQ9NV56 204 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 NFKBIL1Q9UBC1 381 aaPredicted RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 CFDP1Q9UEE9 299 aaPredicted RBP1.93□□□□□ -2.1
SMAD1-203ENST00000502342 TSPAN16Q9UKR8 245 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 MGAT4AQ9UM21 535 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 KLK4Q9Y5K2 254 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 RALGAPA1Q6GYQ0 2036 aa1.93□□□□□ -2.1
SMAD1-203ENST00000502342 C2orf92A0A1B0GVN3 265 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 A8MU76 341 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 TMCO5BA8MYB1 307 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 CCDC188H7C350 402 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF354AO60765 605 aaPredicted RBP1.92□□□□□ -2.1
SMAD1-203ENST00000502342 QDPRP09417 244 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 BDNFP23560 247 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 PRKCIP41743 596 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ELK3P41970 407 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 RPL34P49207 117 aaKnown RBP1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF41P51814 821 aaPredicted RBP1.92□□□□□ -2.1
SMAD1-203ENST00000502342 NAGLUP54802 743 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 PEX3P56589 373 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 EVCP57679 992 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 PTENP60484 403 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 RBBP4Q09028 425 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 CNTN1Q12860 1018 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 C3AR1Q16581 482 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ARMCX4Q5H9R4 360 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 MUC21Q5SSG8 566 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 TMEM182Q6ZP80 229 aaPredicted RBP1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ANKRD46Q86W74 232 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 MEX3DQ86XN8 651 aaKnown RBP1.92□□□□□ -2.1
SMAD1-203ENST00000502342 C4orf19Q8IY42 314 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 TIGD4Q8IY51 512 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ELMOD1Q8N336 334 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 CD177Q8N6Q3 437 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 BANPQ8N9N5 519 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 KIAA1524Q8TCG1 905 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.92□□□□□ -2.1
SMAD1-203ENST00000502342 RIT1Q92963 219 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 GBP5Q96PP8 586 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 INPP5KQ9BT40 448 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 TRIM7Q9C029 511 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 C5orf66Q9H5L9 145 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 MINDY3Q9H8M7 445 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 SH3GLB2Q9NR46 395 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 DEPPQ9NTK1 212 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ABCD2Q9UBJ2 740 aa1.92□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF346Q9UL40 294 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms