RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ACSS1Q9NUB1 689 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 OSER1Q9NX31 292 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 RHCGQ9UBD6 479 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC9A2Q9UBY0 812 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ABT1Q9ULW3 272 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PCDHA7Q9UN72 937 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 MRPS33Q9Y291 106 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 TESMINQ9Y4I5 508 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ATG4BQ9Y4P1 393 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZHX2Q9Y6X8 837 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SF3B1O75533 1304 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CENPVL1A0A0U1RR11 272 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMEM129A0AVI4 362 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 MAGEB16A2A368 324 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 PIPSLA2A3N6 862 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 FAM149AA5PLN7 773 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC15A5A6NIM6 579 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 PRSS46E5RG02 174 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 SPECC1L-ADORA2AF8WAN1 911 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMEM189-UBE2V1I3L0A0 370 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMCC1O94876 653 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 OR4F21O95013 312 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 POP4O95707 220 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TOP3BO95985 862 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 AGTP01019 485 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 KRT14P02533 472 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 OR2T7P0C7T2 308 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ODC1P11926 461 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 APEHP13798 732 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 B4GALT1P15291 398 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 HNF1AP20823 631 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 HRH2P25021 359 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 MARCKSP29966 332 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 HSD17B3P37058 310 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 NSFP46459 744 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CDX1P47902 265 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 FNTAP49354 379 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ALDH7A1P49419 539 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ENTPD1P49961 510 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TIMM10P62072 90 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 SNRPEP62304 92 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 DSC1Q08554 894 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 UBE2V1Q13404 147 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CUL1Q13616 776 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TUBA3CQ13748 450 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 KRT31Q15323 416 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TPD52L1Q16890 204 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 DCAF6Q58WW2 860 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CMPK2Q5EBM0 449 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 RNASE12Q5GAN4 147 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 XKR3Q5GH77 459 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 C10orf120Q5SQS8 335 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ATF7IP2Q5U623 682 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 LYSMD4Q5XG99 296 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TTC19Q6DKK2 380 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ASPHD2Q6ICH7 369 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 PLEKHA7Q6IQ23 1121 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ANKRD54Q6NXT1 300 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TUBA3EQ6PEY2 450 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMEM65Q6PI78 240 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZNF474Q6S9Z5 364 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 OLFML1Q6UWY5 402 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CWC27Q6UX04 472 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 VSTM1Q6UX27 236 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZNF704Q6ZNC4 412 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 Q6ZNX1 250 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 BIVMQ86UB2 503 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 UBQLNLQ8IYU4 475 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 GCNT2Q8N0V5 402 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 THEM5Q8N1Q8 247 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ARHGAP24Q8N264 748 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 PAQR4Q8N4S7 273 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 BPIFCQ8NFQ6 507 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 C17orf50Q8WW18 174 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 LIPHQ8WWY8 451 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TRIB2Q92519 343 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 OSTF1Q92882 214 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 FUBP1Q96AE4 644 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 RHBDF1Q96CC6 855 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 RNF183Q96D59 192 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 LRR1Q96L50 414 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 MMS19Q96T76 1030 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 C17orf62Q9BQA9 187 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 BPIFA3Q9BQP9 254 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 TRMOQ9BU70 441 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 NTMT1Q9BV86 223 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 MRPL13Q9BYD1 178 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CIPCQ9C0C6 399 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 BOLA2Q9H3K6 86 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 MVB12BQ9H7P6 319 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CATSPERBQ9H7T0 1116 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 WDR76Q9H967 626 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 CDH20Q9HBT6 801 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 DUSP22Q9NRW4 184 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 MRPL17Q9NRX2 175 aaKnown RBP4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 FLRT1Q9NZU1 646 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 NFE2L3Q9Y4A8 694 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 PCDHAC2Q9Y5I4 1007 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 LAMB1P07942 1786 aa4.07□□□□□ -1.76
HMGB1P21-201ENST00000502313 ARAP2Q8WZ64 1704 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms