RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 LIX1LQ8IVB5 337 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 PALM2Q8IXS6 379 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 TBC1D19Q8N5T2 526 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 OR2M7Q8NG81 312 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 CCDC77Q9BR77 488 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 HAUS8Q9BT25 410 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 SGPP1Q9BX95 441 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 TTTY12Q9BZ98 90 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 RASSF1Q9NS23 344 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 HPF1Q9NWY4 346 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 SAMD15Q9P1V8 674 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 ZFATQ9P243 1243 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 Q9UFV3 132 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 PDE10AQ9Y233 779 aa12.97□□□□□ -0.33
CCDC58-207ENST00000498466 YARS2Q9Y2Z4 477 aaKnown RBP12.97□□□□□ -0.33
CCDC58-207ENST00000498466 FBN3Q75N90 2809 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 ACANP16112 2415 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 TCRBV7S3A2A0A539 114 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 EIF3FO00303 357 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 AVILO75366 819 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 C8GP07360 202 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 RNH1P13489 461 aaKnown RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 TPSB2P20231 275 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 HNF4AP41235 474 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 RAB8AP61006 207 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 CDK16Q00536 496 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 TPSAB1Q15661 275 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 IL20RBQ6UXL0 311 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 C16orf47Q6ZP98 133 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 Q71RC1 249 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 CDC20BQ86Y33 519 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 ABHD11Q8NFV4 315 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 NT5CQ8TCD5 201 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 UTP15Q8TED0 518 aaKnown RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 ASB15Q8WXK1 588 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 PYCR2Q96C36 320 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 VMP1Q96GC9 406 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 PDLIM2Q96JY6 352 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 SARGQ9BW04 601 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 LIN28AQ9H9Z2 209 aaKnown RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 PARVBQ9HBI1 364 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 PNO1Q9NRX1 252 aaKnown RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 TRMT6Q9UJA5 497 aaKnown RBP12.96□□□□□ -0.33
CCDC58-207ENST00000498466 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 LIPGQ9Y5X9 500 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 COMMD10Q9Y6G5 202 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 CAPN6Q9Y6Q1 641 aa12.96□□□□□ -0.33
CCDC58-207ENST00000498466 A0A0G2JMM0 328 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 A0A1W2PPB8 328 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 A0A1W2PRS3 328 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 TRBC2A0A5B9 178 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 URADA6NGE7 173 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 KIR3DP1A8MWS1 328 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 G3V3Y1 287 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 OR2J2O76002 312 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 ZFAND5O76080 213 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 HIST1H2AGP0C0S8 130 aaPredicted RBP12.95□□□□□ -0.34
CCDC58-207ENST00000498466 HIST1H2ADP20671 130 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 ADH7P40394 386 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 SLC1A2P43004 574 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 SARNPP82979 210 aaKnown RBP12.95□□□□□ -0.34
CCDC58-207ENST00000498466 TERF2Q15554 542 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 CCNG2Q16589 344 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 KCTD19Q17RG1 926 aaPredicted RBP12.95□□□□□ -0.34
CCDC58-207ENST00000498466 NDUFAF5Q5TEU4 345 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 HECTD2Q5U5R9 776 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 RTL6Q6ICC9 239 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 LRRC8EQ6NSJ5 796 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 TAOK1Q7L7X3 1001 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 CAMKMTQ7Z624 323 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 STRA8Q7Z7C7 330 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 BIVMQ86UB2 503 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 GPALPP1Q8IXQ4 340 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 OR4K1Q8NGD4 311 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 EEF1AKMT1Q8WVE0 214 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 NCLNQ969V3 563 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 SNF8Q96H20 258 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 HIST1H2AHQ96KK5 128 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 HIST1H2AJQ99878 128 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 H2AFJQ9BTM1 129 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 CLK4Q9HAZ1 481 aaKnown RBP12.95□□□□□ -0.34
CCDC58-207ENST00000498466 ALKBH4Q9NXW9 302 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 CRIM1Q9NZV1 1036 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 ZFP69BQ9UJL9 534 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 ZNF223Q9UK11 482 aaPredicted RBP12.95□□□□□ -0.34
CCDC58-207ENST00000498466 ACAD8Q9UKU7 415 aa12.95□□□□□ -0.34
CCDC58-207ENST00000498466 PABPN1LA6NDY0 278 aaKnown RBP12.94□□□□□ -0.34
CCDC58-207ENST00000498466 A6NNC1 897 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 FAM47E-STBD1D6RA91 191 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 PRKNO60260 465 aaPredicted RBP12.94□□□□□ -0.34
CCDC58-207ENST00000498466 WDR1O75083 606 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 OR6B1O95007 311 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 IGHG3P01860 377 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 UQCRC1P31930 480 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 PEX19P40855 299 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 MAGEA5P43359 124 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms